RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 CEP72Q9P209 647 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 DMGDHQ9UI17 866 aaKnown RBP11.84□□□□□ -0.51
LRAT-201ENST00000336356 PFASO15067 1338 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 ADCY8P40145 1251 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 HMGCS2P54868 508 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 CALCRLQ16602 461 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 SPATA21Q7Z572 469 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 EHD4Q9H223 541 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 TMEM60Q9H2L4 133 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 COL4A3BPQ9Y5P4 624 aa11.84□□□□□ -0.51
LRAT-201ENST00000336356 FAM187AA6NFU0 413 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 LRRC53A6NM62 1247 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 EXOC3L4Q17RC7 722 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 HAUS3Q68CZ6 603 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 TMEM154Q6P9G4 183 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 SDCCAG8Q86SQ7 713 aaPredicted RBP11.83□□□□□ -0.52
LRAT-201ENST00000336356 MTMR14Q8NCE2 650 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 DPF3Q92784 378 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 KIFAP3Q92845 792 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 SSU72P8A0A1W2PR75 194 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 TRIM49BA6NDI0 452 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 ARHGAP42A6NI28 874 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 GSTA2P09210 222 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 ATF2P15336 505 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 DPYDQ12882 1025 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 DGKZQ13574 1117 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 INF2Q27J81 1249 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 PCSK9Q8NBP7 692 aaKnown RBP11.83□□□□□ -0.52
LRAT-201ENST00000336356 DNAJC9Q8WXX5 260 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 VPS37BQ9H9H4 285 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 ZBTB21Q9ULJ3 1066 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 KPNA6O60684 536 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 NQO1P15559 274 aaKnown RBP11.83□□□□□ -0.52
LRAT-201ENST00000336356 CHN1P15882 459 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 MCAMP43121 646 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 CACNB3P54284 484 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 LGSNQ5TDP6 509 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 ALKBH5Q6P6C2 394 aaKnown RBP11.83□□□□□ -0.52
LRAT-201ENST00000336356 SGMS1Q86VZ5 419 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 MAGEC3Q8TD91 643 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 DDX47Q9H0S4 455 aaKnown RBP11.83□□□□□ -0.52
LRAT-201ENST00000336356 ZSWIM5Q9P217 1185 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 KCNB1Q14721 858 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 UAP1Q16222 522 aaPredicted RBP11.83□□□□□ -0.52
LRAT-201ENST00000336356 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
LRAT-201ENST00000336356 DNAJC7Q99615 494 aa11.83□□□□□ -0.52
LRAT-201ENST00000336356 SHOX2O60902 331 aaPredicted RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 FGGP02679 453 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 TMED1Q13445 227 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 KIRREL3Q8IZU9 778 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 RAPGEF5Q92565 580 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 GFM2Q969S9 779 aaKnown RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 PUS7LQ9H0K6 701 aaKnown RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 FGFR1OP2Q9NVK5 253 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 STK17AQ9UEE5 414 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 H0YCG3 227 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 ECEL1O95672 775 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 ADAM9Q13443 819 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 PTPAQ15257 358 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 FAM133AQ8N9E0 248 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 GDAP1Q8TB36 358 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 MRRFQ96E11 262 aaKnown RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 PRMT6Q96LA8 375 aaPredicted RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 UBXN6Q9BZV1 441 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 NFKBIEO00221 500 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 PHBP35232 272 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 DYNLL1P63167 89 aaKnown RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 GFPT1Q06210 699 aaPredicted RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 STXBP2Q15833 593 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 SBK1Q52WX2 424 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 MIER3Q7Z3K6 550 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 NAF1Q96HR8 494 aaKnown RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 IDI2Q9BXS1 227 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 LRFN2Q9ULH4 789 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 KDM3AQ9Y4C1 1321 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 A0A1W2PQJ5 194 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 PALM3A6NDB9 673 aaPredicted RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 DCDC2CA8MYV0 355 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
LRAT-201ENST00000336356 SKAP2O75563 359 aaPredicted RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 ZWINTO95229 277 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 GJC1P36383 396 aa11.82□□□□□ -0.52
LRAT-201ENST00000336356 RPAP3Q9H6T3 665 aaPredicted RBP11.82□□□□□ -0.52
LRAT-201ENST00000336356 DAPK3O43293 454 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 ESRRAP11474 423 aaPredicted RBP11.81□□□□□ -0.52
LRAT-201ENST00000336356 HSPA9P38646 679 aaKnown RBP11.81□□□□□ -0.52
LRAT-201ENST00000336356 COPS2P61201 443 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 NR1H3Q13133 447 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 TRPC3Q13507 836 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 SPARCL1Q14515 664 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 ALX1Q15699 326 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 RILPQ96NA2 401 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 HMX1Q9NP08 348 aaPredicted RBP11.81□□□□□ -0.52
LRAT-201ENST00000336356 ARHGEF37A1IGU5 675 aa11.81□□□□□ -0.52
LRAT-201ENST00000336356 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms