RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ZNF571Q7Z3V5 609 aaPredicted RBP19.55■□□□□ 0.72
PKP3-201ENST00000331563 NELFCDQ8IXH7 590 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 MYOCDQ8IZQ8 938 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 ANKRD42Q8N9B4 389 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 ATP8B4Q8TF62 1192 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 TBC1D7Q9P0N9 293 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 BHMG1C9JSJ3 638 aaPredicted RBP19.55■□□□□ 0.72
PKP3-201ENST00000331563 KRT13P13646 458 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 CDK8P49336 464 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 CNGA2Q16280 664 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 GALNTL6Q49A17 601 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 C10orf76Q5T2E6 689 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 FBXO25Q8TCJ0 367 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 DTNBP1Q96EV8 351 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 ERP44Q9BS26 406 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 DDX4Q9NQI0 724 aaKnown RBP19.55■□□□□ 0.72
PKP3-201ENST00000331563 AIPL1Q9NZN9 384 aa19.55■□□□□ 0.72
PKP3-201ENST00000331563 RAD23BP54727 409 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 LARP4BQ92615 738 aaKnown RBP19.54■□□□□ 0.72
PKP3-201ENST00000331563 EPB41L4BQ9H329 900 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 SEMA4AQ9H3S1 761 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 KCNK9Q9NPC2 374 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 RIC8AQ9NPQ8 531 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 SH3GLB2Q9NR46 395 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 NAGPAQ9UK23 515 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 PVALEFA0A1B0GWK0 134 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 RASGRF2O14827 1237 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 ACTN1P12814 892 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 FGFR4P22455 802 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 SLC35G1Q2M3R5 365 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 ANO7Q6IWH7 933 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 FITM2Q8N6M3 262 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 SEC14L1Q92503 715 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 RAB3IPQ96QF0 476 aaPredicted RBP19.54■□□□□ 0.72
PKP3-201ENST00000331563 ARL2BPQ9Y2Y0 163 aa19.54■□□□□ 0.72
PKP3-201ENST00000331563 SPDYCQ5MJ68 293 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 KIAA0825Q8IV33 1275 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 SYCE1Q8N0S2 351 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 TXLNGYQ9BZA5 131 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 CCDC134Q9H6E4 229 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 AMFRQ9UKV5 643 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 KIAA1551Q9HCM1 1747 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 MYH4Q9Y623 1939 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 H2AFZP0C0S5 128 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 PCP11498 1178 aaKnown RBP19.53■□□□□ 0.72
PKP3-201ENST00000331563 SCNN1BP51168 640 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 H2AFVQ71UI9 128 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 CCDC25Q86WR0 208 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 GDAP1Q8TB36 358 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 DDX12PQ92771 950 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 EYA3Q99504 573 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 PCMTD2Q9NV79 361 aa19.53■□□□□ 0.72
PKP3-201ENST00000331563 SUCLA2Q9P2R7 463 aaPredicted RBP19.53■□□□□ 0.72
PKP3-201ENST00000331563 NKX1-2Q9UD57 310 aaPredicted RBP19.53■□□□□ 0.72
PKP3-201ENST00000331563 BTNL10A8MVZ5 291 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 PDLIM1O00151 329 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 TUBP50607 506 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 LBRQ14739 615 aaKnown RBP19.52■□□□□ 0.72
PKP3-201ENST00000331563 RASGEF1CQ8N431 466 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 TMEM47Q9BQJ4 181 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 MMADHCQ9H3L0 296 aaPredicted RBP19.52■□□□□ 0.72
PKP3-201ENST00000331563 RXFP1Q9HBX9 757 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 VAT1LQ9HCJ6 419 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 ZMYND8Q9ULU4 1186 aaPredicted RBP19.52■□□□□ 0.72
PKP3-201ENST00000331563 DYNC1I2Q13409 638 aaKnown RBP19.52■□□□□ 0.72
PKP3-201ENST00000331563 MASTLQ96GX5 879 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 KLHL14Q9P2G3 628 aa19.52■□□□□ 0.72
PKP3-201ENST00000331563 FAM196BA6NMK8 535 aa19.52■□□□□ 0.71
PKP3-201ENST00000331563 ADAM9Q13443 819 aa19.52■□□□□ 0.71
PKP3-201ENST00000331563 SGSM1Q2NKQ1 1148 aa19.52■□□□□ 0.71
PKP3-201ENST00000331563 TMEM154Q6P9G4 183 aa19.52■□□□□ 0.71
PKP3-201ENST00000331563 USP17L2Q6R6M4 530 aa19.52■□□□□ 0.71
PKP3-201ENST00000331563 VPS36Q86VN1 386 aa19.52■□□□□ 0.71
PKP3-201ENST00000331563 ZDHHC18Q9NUE0 388 aa19.52■□□□□ 0.71
PKP3-201ENST00000331563 H0Y3Z8 333 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 GRB10Q13322 594 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 ZNF211Q13398 564 aaPredicted RBP19.51■□□□□ 0.71
PKP3-201ENST00000331563 NONOQ15233 471 aaKnown RBP eCLIP19.51■□□□□ 0.713e-6■■□□□ 12.2
PKP3-201ENST00000331563 DBN1Q16643 649 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 KIAA1755Q5JYT7 1200 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 UBAP2Q5T6F2 1119 aaKnown RBP19.51■□□□□ 0.71
PKP3-201ENST00000331563 DUPD1Q68J44 220 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 DEFB132Q7Z7B7 95 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 CROCCP2Q86T23 111 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 SYT15Q9BQS2 421 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 COA1Q9GZY4 146 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 BLOC1S4Q9NUP1 217 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 MTRF1LQ9UGC7 380 aaKnown RBP19.51■□□□□ 0.71
PKP3-201ENST00000331563 RASAL2Q9UJF2 1139 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 M0R2N6 131 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 CYTH3O43739 400 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 CREB3O43889 395 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 POLE2P56282 527 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 PTENP60484 403 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 TCP10Q12799 353 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 NFIAQ12857 509 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 ACBD5Q5T8D3 534 aaPredicted RBP19.51■□□□□ 0.71
PKP3-201ENST00000331563 NT5DC3Q86UY8 548 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 ZFPM1Q8IX07 1006 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms