RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 DDX25Q9UHL0 483 aaKnown RBP9.02□□□□□ -0.97
SKA2-201ENST00000330137 NAGPAQ9UK23 515 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 PCDHA4Q9UN74 947 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 CCDC88AQ3V6T2 1871 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 NCANO14594 1321 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SYNGAP1Q96PV0 1343 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 TLDC2A0PJX2 215 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 M0R2N6 131 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 BIRC5O15392 142 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 MAP3K13O43283 966 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 MAP3K7O43318 606 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 PHF2O75151 1096 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 IFNAR2P48551 515 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 CDK7P50613 346 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 PSMD7P51665 324 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 MCL1Q07820 350 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 CCDC6Q16204 474 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 FAM98CQ17RN3 349 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 LRRC74BQ6ZQY2 392 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 BARGINQ6ZT62 677 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 JAMLQ86YT9 394 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ZC3H3Q8IXZ2 948 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 ANKLE1Q8NAG6 615 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 C7orf43Q8WVR3 580 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SCG3Q8WXD2 468 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 SPOCK2Q92563 424 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ARHGEF2Q92974 986 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 ART4Q93070 314 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ZNF496Q96IT1 587 aaPredicted RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 HIC2Q96JB3 615 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 PUS3Q9BZE2 481 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 SYNCQ9H7C4 482 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.01□□□□□ -0.977e-8■■■■■ 186.3
SKA2-201ENST00000330137 GRHL1Q9NZI5 618 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ADAMTS1Q9UHI8 967 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 TACC3Q9Y6A5 838 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ANKRD36CQ5JPF3 1778 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 F8W8V4 182 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 MAFGO15525 162 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 H2AFZP0C0S5 128 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ALAS1P13196 640 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ITGA4P13612 1032 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 GM2AP17900 193 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 STX2P32856 288 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SERPINB4P48594 390 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 HADHBP55084 474 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 RNASE9P60153 205 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 MGAT5Q09328 741 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 USP4Q13107 963 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 TCEAL1Q15170 157 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 VPS72Q15906 364 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 IFIT1BQ5T764 474 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 PHLDB3Q6NSJ2 640 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 CCDC174Q6PII3 467 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 H2AFVQ71UI9 128 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SV2BQ7L1I2 683 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 CCDC82Q8N4S0 544 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SMYD1Q8NB12 490 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ZNF653Q96CK0 615 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 CATSPER2Q96P56 530 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.01□□□□□ -0.97
SKA2-201ENST00000330137 PITPNM3Q9BZ71 974 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 MYLK2Q9H1R3 596 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 GANQ9H2C0 597 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 DENND2DQ9H6A0 471 aaPredicted RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 TBCCD1Q9NVR7 557 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 NKIRAS1Q9NYS0 192 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ZNF232Q9UNY5 417 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SLC4A4Q9Y6R1 1079 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 TMEM221A6NGB7 291 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 MIF4GDA9UHW6 222 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 CCDC22O60826 627 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 IDH1O75874 414 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 PLCG1P19174 1290 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 RAB15P59190 212 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 POLR2FP61218 127 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 MOGSQ13724 837 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ADRM1Q16186 407 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 Q4G0T1 1027 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ALKBH5Q6P6C2 394 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 IRF2BP2Q7Z5L9 587 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SYCP3Q8IZU3 236 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ARHGAP24Q8N264 748 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ANKRD35Q8N283 1001 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 DDX12PQ92771 950 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 SLCO2A1Q92959 643 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 CALML4Q96GE6 196 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ZNF594Q96JF6 807 aaPredicted RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 DHX36Q9H2U1 1008 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 PCDH18Q9HCL0 1135 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 PREBQ9HCU5 417 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 ANGPTL2Q9UKU9 493 aa9.01□□□□□ -0.97
SKA2-201ENST00000330137 THRAP3Q9Y2W1 955 aaKnown RBP9.01□□□□□ -0.97
SKA2-201ENST00000330137 DUOX1Q9NRD9 1551 aa9□□□□□ -0.97
SKA2-201ENST00000330137 UMODL1Q5DID0 1318 aa9□□□□□ -0.97
SKA2-201ENST00000330137 SLC26A4O43511 780 aa9□□□□□ -0.97
SKA2-201ENST00000330137 FGGP02679 453 aa9□□□□□ -0.97
SKA2-201ENST00000330137 ASLP04424 464 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms