RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 RNF19AQ9NV58 838 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 SNX12Q9UMY4 172 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 MAGED2Q9UNF1 606 aaPredicted RBP17.27■□□□□ 0.36
SYNM-201ENST00000328642 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 PHLPP1O60346 1717 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 CTIFO43310 598 aaKnown RBP17.27■□□□□ 0.36
SYNM-201ENST00000328642 PPP2R5AQ15172 486 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 SMAD1Q15797 465 aaKnown RBP17.27■□□□□ 0.36
SYNM-201ENST00000328642 ELOA2Q8IYF1 753 aaPredicted RBP17.27■□□□□ 0.36
SYNM-201ENST00000328642 MCPH1Q8NEM0 835 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 LRRC45Q96CN5 670 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 ADPGKQ9BRR6 497 aa17.27■□□□□ 0.36
SYNM-201ENST00000328642 RBAKQ9NYW8 714 aaPredicted RBP17.27■□□□□ 0.36
SYNM-201ENST00000328642 SLIT2O94813 1529 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 RCCD1A6NED2 376 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 E7EVH7 732 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 OSBPP22059 807 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 ORC1Q13415 861 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 ZNF568Q3ZCX4 644 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 KLHDC7AQ5VTJ3 777 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 STIM2Q9P246 746 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 AGO2Q9UKV8 859 aaKnown RBP17.27■□□□□ 0.35
SYNM-201ENST00000328642 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.35
SYNM-201ENST00000328642 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
SYNM-201ENST00000328642 SOX5P35711 763 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 FMNL3Q8IVF7 1028 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 BCAS4Q8TDM0 211 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 DHX38Q92620 1227 aaKnown RBP17.26■□□□□ 0.35
SYNM-201ENST00000328642 FAM149B1Q96BN6 582 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 PON1P27169 355 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
SYNM-201ENST00000328642 SCYL3Q8IZE3 742 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 GGCXP38435 758 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 ACTR2P61160 394 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 MAPK6Q16659 721 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 KRT39Q6A163 491 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 DNAJC19Q96DA6 116 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 MTMR8Q96EF0 704 aa17.26■□□□□ 0.35
SYNM-201ENST00000328642 SGO2Q562F6 1265 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 SYCP2LQ5T4T6 812 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 ANKRD7Q92527 254 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 CALN1Q9BXU9 219 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 ADAM22Q9P0K1 906 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 ADAM21Q9UKJ8 722 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 TTC7AQ9ULT0 858 aaPredicted RBP17.25■□□□□ 0.35
SYNM-201ENST00000328642 ZSCAN5CA6NGD5 496 aaPredicted RBP17.25■□□□□ 0.35
SYNM-201ENST00000328642 PI4K2BG5E9Z4 385 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 ITGB5P18084 799 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
SYNM-201ENST00000328642 ZWILCHQ9H900 591 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 VPS37BQ9H9H4 285 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 OSGEPQ9NPF4 335 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 PCSK1NQ9UHG2 260 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 DMGDHQ9UI17 866 aaKnown RBP17.25■□□□□ 0.35
SYNM-201ENST00000328642 ALS2Q96Q42 1657 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 LRRD1A4D1F6 860 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 KIF4AO95239 1232 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 VIL1P09327 827 aaKnown RBP17.25■□□□□ 0.35
SYNM-201ENST00000328642 KCNJ1P48048 391 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 TRPM4Q8TD43 1214 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 PSPC1Q8WXF1 523 aaKnown RBP17.25■□□□□ 0.35
SYNM-201ENST00000328642 RIPK3Q9Y572 518 aa17.25■□□□□ 0.35
SYNM-201ENST00000328642 KIAA1755Q5JYT7 1200 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 FBXL13Q8NEE6 735 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 SLC35G2Q8TBE7 412 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 TRAPPC12Q8WVT3 735 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 KAT5Q92993 513 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 RNF34Q969K3 372 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 SEL1LQ9UBV2 794 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 PLS3P13797 630 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 SFNP31947 248 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 EDRF1Q3B7T1 1238 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 MAP1SQ66K74 1059 aaPredicted RBP17.24■□□□□ 0.35
SYNM-201ENST00000328642 DENND2CQ68D51 928 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 SH2D3CQ8N5H7 860 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 C1orf54Q8WWF1 131 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 RIT2Q99578 217 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 NUP85Q9BW27 656 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 APEX2Q9UBZ4 518 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
SYNM-201ENST00000328642 PPFIA1Q13136 1202 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 SPOPLQ6IQ16 392 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 ZNF720Q7Z2F6 126 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 SLC16A10Q8TF71 515 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 CCDC77Q9BR77 488 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 L2HGDHQ9H9P8 463 aa17.24■□□□□ 0.35
SYNM-201ENST00000328642 F5H423 210 aaPredicted RBP17.23■□□□□ 0.35
SYNM-201ENST00000328642 DAPK3O43293 454 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 ACSL3O95573 720 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 WEE2P0C1S8 567 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 MMP19Q99542 508 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 DNAJC7Q99615 494 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 POLR3CQ9BUI4 534 aaPredicted RBP17.23■□□□□ 0.35
SYNM-201ENST00000328642 MOV10L1Q9BXT6 1211 aaKnown RBP17.23■□□□□ 0.35
SYNM-201ENST00000328642 PITPNM2Q9BZ72 1349 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 GAS8O95995 478 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 CCT5P48643 541 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 ZNF571Q7Z3V5 609 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms