RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 BAHCC1Q9P281 2608 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 FANCD2Q9BXW9 1451 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 MUSKO15146 869 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 GAS7O60861 476 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 CTCFP49711 727 aaPredicted RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 SLC6A3Q01959 620 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 ADCY1Q08828 1119 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 EPHA7Q15375 998 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 SLFN12LQ6IEE8 588 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 TCTN3Q6NUS6 607 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 ZNF585AQ6P3V2 769 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 LARP4Q71RC2 724 aaKnown RBP eCLIP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 TAX1BP1Q86VP1 789 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 KIF18BQ86Y91 864 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 NINJ1Q92982 152 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 LPPQ93052 612 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 MAML3Q96JK9 1138 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 FEZ1Q99689 392 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 ORAI3Q9BRQ5 295 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 ZFR2Q9UPR6 939 aaKnown RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 VWA7Q9Y334 891 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 DVL2O14641 736 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 MAFGO15525 162 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 KPNA6O60684 536 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 RPS19P39019 145 aaKnown RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 STAT5BP51692 787 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 NEK4P51957 841 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 TAF7LQ5H9L4 462 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 PRAMEF9Q5VWM5 478 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 KLHDC10Q6PID8 442 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 GGNQ86UU5 652 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 PASD1Q8IV76 773 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 NIM1KQ8IY84 436 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 ZZZ3Q8IYH5 903 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 PPM1KQ8N3J5 372 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 C7orf31Q8N865 590 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 Q8TCH9 128 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 RPGRQ92834 1020 aaKnown RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 DPYSL5Q9BPU6 564 aa2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 SAE1Q9UBE0 346 aaPredicted RBP2.33□□□□□ -2.04
CCDC144A-201ENST00000328495 H2AFYO75367 372 aaKnown RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 RAD17O75943 681 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 COMTP21964 271 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 DGKDQ16760 1214 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 CNNM4Q6P4Q7 775 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 POLNQ7Z5Q5 900 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 LRRTM3Q86VH5 581 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 PALM2Q8IXS6 379 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 OR5AN1Q8NGI8 311 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 C16orf92Q96LL3 132 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 OR14A2Q96R54 314 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 TUBGCP5Q96RT8 1024 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 IFT57Q9NWB7 429 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 JAG2Q9Y219 1238 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 SPO11Q9Y5K1 396 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 MRPL42Q9Y6G3 142 aaKnown RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 SLC30A1Q9Y6M5 507 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 FHOD3Q2V2M9 1422 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 AGLP35573 1532 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 LAMC1P11047 1609 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 FOXS1O43638 330 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 SLC9A1P19634 815 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 POU3F2P20265 443 aaPredicted RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 RGS3P49796 1198 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 BCAR1P56945 870 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 OCRLQ01968 901 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 NOLC1Q14978 699 aaKnown RBP eCLIP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 TBR1Q16650 682 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 TKFCQ3LXA3 575 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 TIGD7Q6NT04 549 aaPredicted RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 JAZF1Q86VZ6 243 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 PHYKPLQ8IUZ5 450 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 AHI1Q8N157 1196 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 OR14K1Q8NGZ2 314 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 GFM2Q969S9 779 aaKnown RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 MFSD3Q96ES6 412 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 PLA2G12BQ9BX93 195 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 TOMM22Q9NS69 142 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 KCMF1Q9P0J7 381 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 CEP170BQ9Y4F5 1589 aaPredicted RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 MARF1Q9Y4F3 1742 aaKnown RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 PMS2P1A4D2B8 440 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 PTX3P26022 381 aaPredicted RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 SART3Q15020 963 aaKnown RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 PRKD1Q15139 912 aaPredicted RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 C21orf62-AS1Q17RA5 79 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 FUKQ8N0W3 1084 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 EFHBQ8N7U6 833 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 SH3RF3Q8TEJ3 882 aaPredicted RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 FAM89AQ96GI7 184 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 ELF4Q99607 663 aaPredicted RBP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 NELFAQ9H3P2 528 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 OXSMQ9NWU1 459 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 DENND2AQ9ULE3 1009 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 TESMINQ9Y4I5 508 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 FAM135AQ9P2D6 1515 aa2.32□□□□□ -2.04
CCDC144A-201ENST00000328495 MATN2O00339 956 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms