RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 CUEDC2Q9H467 287 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 PCIF1Q9H4Z3 704 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 LRRC4BQ9NT99 713 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 MAST2Q6P0Q8 1798 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 CHD4Q14839 1912 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 AKAP11Q9UKA4 1901 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 ENTPD5O75356 428 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 CBX6O95503 412 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 RARAP10276 462 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 COPS2P61201 443 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 UBXN2AP68543 259 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 CTTNQ14247 550 aaKnown RBP10.28□□□□□ -0.76
DDX53-201ENST00000327968 ZC2HC1CQ53FD0 456 aaPredicted RBP10.28□□□□□ -0.76
DDX53-201ENST00000327968 TLDC1Q6P9B6 456 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 SCFD1Q8WVM8 642 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 ARHGEF1Q92888 912 aaKnown RBP10.28□□□□□ -0.76
DDX53-201ENST00000327968 PABPC3Q9H361 631 aaKnown RBP10.28□□□□□ -0.76
DDX53-201ENST00000327968 HOMER3Q9NSC5 361 aa10.28□□□□□ -0.76
DDX53-201ENST00000327968 DPPA5A6NC42 116 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 ANKRD62A6NC57 917 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 CCDC188H7C350 402 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 AKAP3O75969 853 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 PON1P27169 355 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 RCAN1P53805 252 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 IRX1P78414 480 aaPredicted RBP10.27□□□□□ -0.76
DDX53-201ENST00000327968 RBBP5Q15291 538 aaKnown RBP10.27□□□□□ -0.76
DDX53-201ENST00000327968 TAOK1Q7L7X3 1001 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 ZNF572Q7Z3I7 529 aaPredicted RBP10.27□□□□□ -0.76
DDX53-201ENST00000327968 SPATA21Q7Z572 469 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 NT5DC3Q86UY8 548 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 TTC8Q8TAM2 541 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 RIC8AQ9NPQ8 531 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 NKIRAS1Q9NYS0 192 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.76
DDX53-201ENST00000327968 LTBP1Q14766 1721 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 THAP12O43422 761 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 LDHBP07195 334 aaKnown RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 RFC4P35249 363 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 DRAP1Q14919 205 aaPredicted RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 TMEM154Q6P9G4 183 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 ARMC9Q7Z3E5 817 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 IRF2BP2Q7Z5L9 587 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 DDX50Q9BQ39 737 aaKnown RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 PITPNM3Q9BZ71 974 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 ANAPC4Q9UJX5 808 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 MINPP1Q9UNW1 487 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 LRRD1A4D1F6 860 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 SNX3O60493 162 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 RTN2O75298 545 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 LCA5LO95447 670 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 BRD2P25440 801 aaKnown RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 ZNF76P36508 570 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 RANBP1P43487 201 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 GRM4Q14833 912 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 RNF220Q5VTB9 566 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 APBB1IPQ7Z5R6 666 aaPredicted RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 TRIM59Q8IWR1 403 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 C4orf33Q8N1A6 199 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 RUBCNQ92622 972 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 NAF1Q96HR8 494 aaKnown RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 ZNF317Q96PQ6 595 aaPredicted RBP10.27□□□□□ -0.77
DDX53-201ENST00000327968 SLCO1B3Q9NPD5 702 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 DNAJC12Q9UKB3 198 aa10.27□□□□□ -0.77
DDX53-201ENST00000327968 FAM196BA6NMK8 535 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 TBCAO75347 108 aaKnown RBP10.26□□□□□ -0.77
DDX53-201ENST00000327968 RFC5P40937 340 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 PPP1R2P41236 205 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 TUBP50607 506 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 COG2Q14746 738 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 SETDB1Q15047 1291 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 TBC1D9BQ66K14 1250 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 ZC3H18Q86VM9 953 aaKnown RBP10.26□□□□□ -0.77
DDX53-201ENST00000327968 EGFL6Q8IUX8 553 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 SYCP3Q8IZU3 236 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 ACTRT1Q8TDG2 376 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 SLC20A1Q8WUM9 679 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 ATXN2LQ8WWM7 1075 aaKnown RBP10.26□□□□□ -0.77
DDX53-201ENST00000327968 BHMT2Q9H2M3 363 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 ADAM22Q9P0K1 906 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
DDX53-201ENST00000327968 PVALEFA0A1B0GWK0 134 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 ZBTB39O15060 712 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 KRT15P19012 456 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 EPHB2P29323 1055 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 NMT1P30419 496 aaKnown RBP10.26□□□□□ -0.77
DDX53-201ENST00000327968 OVGP1Q12889 678 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 SEPT7Q16181 437 aaKnown RBP10.26□□□□□ -0.77
DDX53-201ENST00000327968 C6orf118Q5T5N4 469 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 SEL1L2Q5TEA6 688 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 EXOC3L1Q86VI1 746 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 SYCE1Q8N0S2 351 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 MYCT1Q8N699 235 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 RPS6KC1Q96S38 1066 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 TRIM7Q9C029 511 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 TTC7AQ9ULT0 858 aaPredicted RBP10.26□□□□□ -0.77
DDX53-201ENST00000327968 ALG6Q9Y672 507 aa10.26□□□□□ -0.77
DDX53-201ENST00000327968 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.26□□□□□ -0.77
DDX53-201ENST00000327968 A0A1B0GVG6 124 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms