RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ZNF473Q8WTR7 871 aaKnown RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 CDV3Q9UKY7 258 aaKnown RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 CPA2P48052 419 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 TBL3Q12788 808 aaKnown RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 IMPG1Q17R60 797 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 ZNF658Q5TYW1 1059 aaPredicted RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 CAB39Q9Y376 341 aaPredicted RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 GPATCH8Q9UKJ3 1502 aaKnown RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 MECOMQ03112 1051 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 DSTYKQ6XUX3 929 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 UNC5CLQ8IV45 518 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 ASPSCR1Q9BZE9 553 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 BRD8Q9H0E9 1235 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 RPF1Q9H9Y2 349 aaKnown RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 COL17A1Q9UMD9 1497 aaPredicted RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 PIK3R2O00459 728 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 RGS12O14924 1447 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 ZNF185O15231 689 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 ATP1A1P05023 1023 aaKnown RBP8.4□□□□□ -1.06
CIITA-201ENST00000324288 PRR29P0C7W0 189 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 PLA2G4BP0C869 781 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 RABGAP1LQ5R372 815 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 PKD2L2Q9NZM6 624 aa8.4□□□□□ -1.06
CIITA-201ENST00000324288 TAC1P20366 129 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 ZBED6P86452 979 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 KDELC2Q7Z4H8 507 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 PIGOQ8TEQ8 1089 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 PRMT1Q99873 361 aaKnown RBP8.4□□□□□ -1.07
CIITA-201ENST00000324288 PHF20L1A8MW92 1017 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 AIM2O14862 343 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 DRP2Q13474 957 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 SLC27A3Q5K4L6 730 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 SYDE2Q5VT97 1194 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 SMARCAL1Q9NZC9 954 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 HSPBP1Q9NZL4 362 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 LGALS16A8MUM7 142 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 PMS2P54278 862 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 ANGPT1Q15389 498 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 CNBD2Q96M20 576 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 KIF1BO60333 1816 aa8.4□□□□□ -1.07
CIITA-201ENST00000324288 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
CIITA-201ENST00000324288 KIF23Q02241 960 aaPredicted RBP8.39□□□□□ -1.07
CIITA-201ENST00000324288 IYDQ6PHW0 289 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 DNAJC9Q8WXX5 260 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 TRIM11Q96F44 468 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ATP6V1G3Q96LB4 118 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 CHN1P15882 459 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 TEX9Q8N6V9 391 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 C1orf54Q8WWF1 131 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 TTC25Q96NG3 672 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 KLHL8Q9P2G9 620 aaPredicted RBP8.39□□□□□ -1.07
CIITA-201ENST00000324288 COPS2P61201 443 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 CARD9Q9H257 536 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 GJB4Q9NTQ9 266 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ZSCAN32Q9NX65 697 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 PRPF4O43172 522 aaKnown RBP eCLIP8.39□□□□□ -1.07
CIITA-201ENST00000324288 PYGBP11216 843 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 HSPA6P17066 643 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 SERPINB10P48595 397 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ABHD8Q96I13 439 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ZNF341Q9BYN7 854 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ANAPC7Q9UJX3 599 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 GAP43P17677 238 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 CCDC144BQ3MJ40 725 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 IFNEQ86WN2 208 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 TEKT4Q8WW24 435 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ZBED2Q9BTP6 218 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 TRIM49BA6NDI0 452 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ORC4O43929 436 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 DDIASQ8IXT1 998 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 DDX47Q9H0S4 455 aaKnown RBP8.39□□□□□ -1.07
CIITA-201ENST00000324288 PCSK1NQ9UHG2 260 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 SMNDC1O75940 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
CIITA-201ENST00000324288 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 OSBPL9Q96SU4 736 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 SEC31BQ9NQW1 1179 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 CACNB3P54284 484 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 NAIF1Q69YI7 327 aaPredicted RBP8.39□□□□□ -1.07
CIITA-201ENST00000324288 CCDC103Q8IW40 242 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ANTXR1Q9H6X2 564 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 STK17AQ9UEE5 414 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 RWDD2AQ9UIY3 292 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ABCA10Q8WWZ4 1543 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ABCC4O15439 1325 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 MYO1GB0I1T2 1018 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 SKAP2O75563 359 aaPredicted RBP8.39□□□□□ -1.07
CIITA-201ENST00000324288 FMNL1O95466 1100 aaPredicted RBP8.39□□□□□ -1.07
CIITA-201ENST00000324288 OSBPP22059 807 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 MORF4L2Q15014 288 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 ARL13BQ3SXY8 428 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 EXOC8Q8IYI6 725 aa8.39□□□□□ -1.07
CIITA-201ENST00000324288 PDE5AO76074 875 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 SLC39A14Q15043 492 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 HIF1AQ16665 826 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 TMA16Q96EY4 203 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms