RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 TRIM72Q6ZMU5 477 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FBXL16Q8N461 479 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 HPS3Q969F9 1004 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ATG4CQ96DT6 458 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MAP3K20Q9NYL2 800 aaKnown RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 HSPBP1Q9NZL4 362 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 BUB1BO60566 1050 aaPredicted RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SEC31AO94979 1220 aaKnown RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GH1P01241 217 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ATP1A2P50993 1020 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CUL1Q13616 776 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DUOXA2Q1HG44 320 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GMCL1Q96IK5 515 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ATP8A1Q9Y2Q0 1164 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PPP2R5CQ13362 524 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 USP49Q70CQ1 688 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 POLR3CQ9BUI4 534 aaPredicted RBP13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DDX23Q9BUQ8 820 aaKnown RBP13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ASNSD1Q9NWL6 643 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 EIF3DO15371 548 aaKnown RBP eCLIP13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CPP00450 1065 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CIITAP33076 1130 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MOXD1Q6UVY6 613 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PPFIBP2Q8ND30 876 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MCUR1Q96AQ8 359 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 VPS33BQ9H267 617 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CCDC68Q9H2F9 335 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 POC1B-GALNT4F8VUJ3 575 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 BASP1P80723 227 aaKnown RBP13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 KLHL14Q9P2G3 628 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 IFT172Q9UG01 1749 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GOLGA8CPA6NN73 597 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZNF18P17022 549 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DHX9Q08211 1270 aaKnown RBP13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 STK4Q13043 487 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PASD1Q8IV76 773 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CFAP57Q96MR6 1250 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 AGXT2Q9BYV1 514 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 KCNH7Q9NS40 1196 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CEP57Q86XR8 500 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SAMD3Q8N6K7 520 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MORC4Q8TE76 937 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RILPQ96NA2 401 aa13.74□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SNRPFP62306 86 aaKnown RBP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 LLGL1Q15334 1064 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CDO1Q16878 200 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZNF564Q8TBZ8 553 aaPredicted RBP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 URGCPQ8TCY9 931 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 HSPH1Q92598 858 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CPSF3Q9UKF6 684 aaKnown RBP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 KNDC1Q76NI1 1749 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PODXLO00592 558 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 EMC2Q15006 297 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GPRC5AQ8NFJ5 357 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DPF2Q92785 391 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 C11orf70Q9BRQ4 267 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PLSCR1O15162 318 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PTPAQ15257 358 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CACNA2D3Q8IZS8 1091 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZNF668Q96K58 619 aaPredicted RBP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 NUP85Q9BW27 656 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 INPP5FQ9Y2H2 1132 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PPP2R3BQ9Y5P8 575 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SHPRHQ149N8 1683 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 HGSO14964 777 aaPredicted RBP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TSPY1Q01534 308 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PRKCEQ02156 737 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SDCCAG8Q86SQ7 713 aaPredicted RBP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 VGLL2Q8N8G2 317 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ENGASEQ8NFI3 743 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 NGRNQ9NPE2 291 aaKnown RBP13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TMX2Q9Y320 296 aa13.73□□□□□ -0.21
SH3PXD2A-201ENST00000315994 M0QYV0 167 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZBED1O96006 694 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZNF157P51786 506 aaPredicted RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ACER1Q8TDN7 264 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GCNAQ96QF7 691 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FMO2Q99518 471 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 KATNAL1Q9BW62 490 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ADARB2Q9NS39 739 aaKnown RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MAGEB2O15479 319 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZRANB2O95218 330 aaKnown RBP eCLIP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RASSF2P50749 326 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RPS6P62753 249 aaKnown RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TMEM143Q96AN5 459 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SCYL1Q96KG9 808 aa13.72□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ANKEF1Q9NU02 776 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms