RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 H2AFZP0C0S5 128 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 RALAP11233 206 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 ATP11AP98196 1134 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 CXCL17Q6UXB2 119 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 H2AFVQ71UI9 128 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 RABGGTAQ92696 567 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 STRIP2Q9ULQ0 834 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 RSPH10B2B2RC85 870 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 RSPH10BP0C881 870 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 STAG3L1P0CL83 205 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 SOX10P56693 466 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 RPUSD2Q8IZ73 545 aaKnown RBP9.68□□□□□ -0.86
CTC1-201ENST00000315684 YIPF2Q9BWQ6 316 aa9.68□□□□□ -0.86
CTC1-201ENST00000315684 ASMTLO95671 621 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 CXCR5P32302 372 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 PPP4R4Q6NUP7 873 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 LRRC31Q6UY01 552 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 UNC45AQ9H3U1 944 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTC1-201ENST00000315684 UBE4BO95155 1302 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 PPLO60437 1756 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 ABCD1P33897 745 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 YWHAGP61981 247 aaKnown RBP eCLIP9.67□□□□□ -0.866e-25■□□□□ 9.9
CTC1-201ENST00000315684 BASP1P80723 227 aaKnown RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 BTG3Q14201 252 aaPredicted RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 EPHA7Q15375 998 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 ZC2HC1CQ53FD0 456 aaPredicted RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 ATF7IP2Q5U623 682 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 ARHGEF18Q6ZSZ5 1173 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 GPD1LQ8N335 351 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 FBF1Q8TES7 1133 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 PPP4R1Q8TF05 950 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 CFAP36Q96G28 342 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 TRIM56Q9BRZ2 755 aaKnown RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 MAGEF1Q9HAY2 307 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 TJP2Q9UDY2 1190 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 SBK1Q52WX2 424 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 MUM1L1Q5H9M0 696 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 TRAPPC12Q8WVT3 735 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 SEPT8Q92599 483 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 ATP6V1E2Q96A05 226 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 DHTKD1Q96HY7 919 aaPredicted RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 HBP1O60381 514 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 VIMP08670 466 aaKnown RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 SLFN14P0C7P3 912 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 USP11P51784 963 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 ALX1Q15699 326 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 TMTC4Q5T4D3 741 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 SRGAP1Q7Z6B7 1085 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 CACUL1Q86Y37 369 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 IFT43Q96FT9 208 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 RPGRIP1Q96KN7 1286 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 CACYBPQ9HB71 228 aaKnown RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 AFF4Q9UHB7 1163 aaKnown RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 ASTN2O75129 1339 aaPredicted RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 CYBBP04839 570 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 KRT10P13645 584 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 KLRC2P26717 231 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 HDLBPQ00341 1268 aaKnown RBP9.67□□□□□ -0.86
CTC1-201ENST00000315684 RBL2Q08999 1139 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 MSRAQ9UJ68 235 aa9.67□□□□□ -0.86
CTC1-201ENST00000315684 MXD4Q14582 209 aaPredicted RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 PSMD6Q15008 389 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 CCDC6Q16204 474 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 GPRC5CQ9NQ84 441 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 MAD2L2Q9UI95 211 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 DNAJC12Q9UKB3 198 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 PCDHB12Q9Y5F1 795 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 PFDN6O15212 129 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 GRAP2O75791 330 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 B3GAT3O94766 335 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 MYL4P12829 197 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 PMLP29590 882 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 NSUN2Q08J23 767 aaKnown RBP eCLIP9.66□□□□□ -0.861e-323■■■■■ 1506.6
CTC1-201ENST00000315684 ACVR2BQ13705 512 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 MAN2A1Q16706 1144 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 NUDT18Q6ZVK8 323 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 PPP1R9AQ9ULJ8 1098 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 GMNNO75496 209 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 S100BP04271 92 aaPredicted RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 KLRC1P26715 233 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 RFX5P48382 616 aaPredicted RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 DUOXA2Q1HG44 320 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 TAF1DQ9H5J8 278 aaPredicted RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 SPTLC3Q9NUV7 552 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 STXBP3O00186 592 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 ENC1O14682 589 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 GPR182O15218 404 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 FSCN1Q16658 493 aaKnown RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 ANKRD42Q8N9B4 389 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 ASIC4Q96FT7 647 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 STMN4Q9H169 189 aaPredicted RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 SP110Q9HB58 689 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 ZMYND8Q9ULU4 1186 aaPredicted RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 VIL1P09327 827 aaKnown RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 IL1R1P14778 569 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 GNA15P30679 374 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 ST8SIA6P61647 398 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 MTG1Q9BT17 334 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms