RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 NPTX2P47972 431 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 ACTR2P61160 394 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 MYL7Q01449 175 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 DRAP1Q14919 205 aaPredicted RBP13.52□□□□□ -0.25
RNF4-201ENST00000314289 FOXR1Q6PIV2 292 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 CBWD2Q8IUF1 395 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 SYN2Q92777 582 aaPredicted RBP13.52□□□□□ -0.25
RNF4-201ENST00000314289 NOX5Q96PH1 765 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 ALS2CR12Q96Q35 445 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 SNX12Q9UMY4 172 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 JRKLQ9Y4A0 524 aa13.52□□□□□ -0.25
RNF4-201ENST00000314289 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 EVI5O60447 810 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 ERLIN1O75477 346 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 NOP2P46087 812 aaKnown RBP13.51□□□□□ -0.25
RNF4-201ENST00000314289 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 SRLQ86TD4 932 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 ACCSQ96QU6 501 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 INTS2Q9H0H0 1204 aaKnown RBP13.51□□□□□ -0.25
RNF4-201ENST00000314289 ACP6Q9NPH0 428 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 SLC9A2Q9UBY0 812 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 CSADQ9Y600 493 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 ADGRA3Q8IWK6 1321 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 RBAK-RBAKDNI3L0D1 243 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 USP8P40818 1118 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 PRKCEQ02156 737 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 SKIDA1Q1XH10 827 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 KAT5Q92993 513 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 OSBPL9Q96SU4 736 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 TLR10Q9BXR5 811 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 PFASO15067 1338 aa13.51□□□□□ -0.25
RNF4-201ENST00000314289 ANKRD65E5RJM6 399 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 PGK2P07205 417 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 ADRB2P07550 413 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 ADSSP30520 456 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 SFNP31947 248 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 CREG2Q8IUH2 290 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 U2AF1L4Q8WU68 220 aaKnown RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 GPRASP2Q96D09 838 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 FDX1P10109 184 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 KRT13P13646 458 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 YBX3P16989 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
RNF4-201ENST00000314289 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 TMEM143Q96AN5 459 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 KMT5AQ9NQR1 393 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 NAGPAQ9UK23 515 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 F8VZ95 297 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 ABCB4P21439 1286 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 VAMP7P51809 220 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 JAM2P57087 298 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 MAP2K1Q02750 393 aaPredicted RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 DMP1Q13316 513 aaPredicted RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 HSP90B2PQ58FF3 399 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 ZNF746Q6NUN9 644 aaPredicted RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 ARHGEF19Q8IW93 802 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 TMEM161BQ8NDZ6 487 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 HDAC7Q8WUI4 952 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 CHORDC1Q9UHD1 332 aaPredicted RBP13.5□□□□□ -0.25
RNF4-201ENST00000314289 HYOU1Q9Y4L1 999 aa13.5□□□□□ -0.25
RNF4-201ENST00000314289 FOXN3O00409 490 aaPredicted RBP13.49□□□□□ -0.25
RNF4-201ENST00000314289 DDX3XO00571 662 aaKnown RBP eCLIP13.49□□□□□ -0.252e-8■■■□□ 17.9
RNF4-201ENST00000314289 PJA2O43164 708 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 LYPLA2O95372 231 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 CNGA1P29973 690 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 SLC7A5Q01650 507 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 TUBB2AQ13885 445 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 XXYLT1Q8NBI6 393 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 MKNK1Q9BUB5 465 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 TUBB2BQ9BVA1 445 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 SPON1Q9HCB6 807 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
RNF4-201ENST00000314289 PSD3Q9NYI0 1048 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 TBX20Q9UMR3 447 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
RNF4-201ENST00000314289 OAZ1P54368 228 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 GTF2BQ00403 316 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 NAB2Q15742 525 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 C1orf220Q5T0J3 134 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 LMBRD2Q68DH5 695 aaPredicted RBP13.49□□□□□ -0.25
RNF4-201ENST00000314289 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
RNF4-201ENST00000314289 ADARB2Q9NS39 739 aaKnown RBP13.49□□□□□ -0.25
RNF4-201ENST00000314289 STBD1O95210 358 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 PSAPP07602 524 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 DLATP10515 647 aaKnown RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 STAT1P42224 750 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 CASP8Q14790 479 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 CCDC181Q5TID7 509 aa13.48□□□□□ -0.25
RNF4-201ENST00000314289 LNX1Q8TBB1 728 aaPredicted RBP13.48□□□□□ -0.25
RNF4-201ENST00000314289 ATP6V0A1Q93050 837 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms