RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 BTBD18B2RXH4 712 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 IGF2BP3O00425 579 aaKnown RBP eCLIP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 OAZ1P54368 228 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 GTF2H3Q13889 308 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 NFE2Q16621 373 aaPredicted RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 IQSEC2Q5JU85 1478 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 NBPF10Q6P3W6 841 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 GUF1Q8N442 669 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 FMO2Q99518 471 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 MRIQ9BWK5 157 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 RNF146Q9NTX7 359 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PCDHA6Q9UN73 950 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PCDHA8Q9Y5H6 950 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SLC4A7Q9Y6M7 1214 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PARP4Q9UKK3 1724 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SPDYE2BA6NHP3 402 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 GOLGA8KD6RF30 607 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ALDH1A2O94788 518 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 BRD1O95696 1058 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SPDYE6P0CI01 402 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 HARS2P49590 506 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 CDK17Q00537 523 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PTPN12Q05209 780 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 EPHA7Q15375 998 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 TSGA10IPQ3SY00 556 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 KRT71Q3SY84 523 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 TEDDM1Q5T9Z0 273 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 TMCO4Q5TGY1 634 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 TYW1BQ6NUM6 668 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 MOXD1Q6UVY6 613 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 LRRC8CQ8TDW0 803 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SLC20A1Q8WUM9 679 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 OSBP2Q969R2 916 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 LRGUKQ96M69 825 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ISCA1Q9BUE6 129 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 COLEC11Q9BWP8 271 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 MRPL9Q9BYD2 267 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ANKEF1Q9NU02 776 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PPP1R9AQ9ULJ8 1098 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 MYH2Q9UKX2 1941 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 KCNK3O14649 394 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 HGSO14964 777 aaPredicted RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SDC4P31431 198 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 MSH2P43246 934 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 GPC3P51654 580 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 STAT5BP51692 787 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 RBP5P82980 135 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ME3Q16798 604 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 DCAF4L1Q3SXM0 396 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 CALML6Q8TD86 181 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 BSNDQ8WZ55 320 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 HDAC11Q96DB2 347 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PPP1R13BQ96KQ4 1090 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 LSM14BQ9BX40 385 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 FRMD8P1Q9BZ68 369 aaPredicted RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PLEKHA5Q9HAU0 1116 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PRDM16Q9HAZ2 1276 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGEF28Q8N1W1 1705 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PITPNM2Q9BZ72 1349 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 E5RI56 91 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ATP5HO75947 161 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SUN1O94901 812 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ZBED1O96006 694 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PCSK2P16519 638 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 GRIN1Q05586 938 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PIGHQ14442 188 aaPredicted RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SGO2Q562F6 1265 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SYDE1Q6ZW31 735 aaPredicted RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 DCP1BQ8IZD4 617 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 OR6B3Q8NGW1 331 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 DPF2Q92785 391 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGEF2Q92974 986 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ARL8AQ96BM9 186 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 STRBPQ96SI9 672 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 KIFC3Q9BVG8 833 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 CATSPERBQ9H7T0 1116 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 YY1AP1Q9H869 796 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PNPLA6Q8IY17 1366 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SPATA31A5Q5VU36 1347 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SPATA31A7Q8IWB4 1347 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC160A6NGH7 325 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PLSCR1O15162 318 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 F9P00740 461 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 RGS4P49798 205 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 RPL10AP62906 217 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 SLC15A2Q16348 729 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PABPC1LQ4VXU2 614 aaKnown RBP3.4□□□□□ -1.87
CLOCK-201ENST00000309964 TAF2Q6P1X5 1199 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 USP38Q8NB14 1042 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 MYOZ2Q9NPC6 264 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 ZMYM5Q9UJ78 669 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 RWDD3Q9Y3V2 267 aa3.4□□□□□ -1.87
CLOCK-201ENST00000309964 PYGBP11216 843 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ADD1P35611 737 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CDR2Q01850 454 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ADCY2Q08462 1091 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SMARCB1Q12824 385 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 C16orf72Q14CZ0 275 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SKIV2LQ15477 1246 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms