RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 KRT82Q9NSB4 513 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 P4HBP07237 508 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 SAAL1Q96ER3 474 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 MTRQ99707 1265 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 SEL1LQ9UBV2 794 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 ZFP69BQ9UJL9 534 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 CAPN11Q9UMQ6 739 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 QARSP47897 775 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 EXOSC10Q01780 885 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 SNRNP48Q6IEG0 339 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 PDXDC1Q6P996 788 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 LXNQ9BS40 222 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 ABCF3Q9NUQ8 709 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 TRMT10CQ7L0Y3 403 aaKnown RBP14.87□□□□□ -0.03
PRKCB-201ENST00000303531 GLYCTKQ8IVS8 523 aa14.87□□□□□ -0.03
PRKCB-201ENST00000303531 SPAG7O75391 227 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 DNAJC8O75937 253 aaPredicted RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 TAC1P20366 129 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 GNA15P30679 374 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 GPC3P51654 580 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 ANKRD40Q6AI12 368 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 BRINP3Q76B58 766 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 NOP9Q86U38 636 aaKnown RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 APOBEC2Q9Y235 224 aaKnown RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 ECE2O60344 883 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 TRIM49P0CI25 452 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 TRIM49CP0CI26 452 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 PCSK1NQ9UHG2 260 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 ORC4O43929 436 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 KITP10721 976 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 KIF19Q2TAC6 998 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 CDC26Q8NHZ8 85 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 PAMP19021 973 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 MDM2Q00987 491 aaPredicted RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 TNFAIP2Q03169 654 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 PNPLA7Q6ZV29 1317 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 F5H6K3 240 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 TBXAS1P24557 533 aaPredicted RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 KLRC3Q07444 240 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 CCDC137Q6PK04 289 aaKnown RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 TRIM59Q8IWR1 403 aa14.86□□□□□ -0.03
PRKCB-201ENST00000303531 SRBD1Q8N5C6 995 aaKnown RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 EIF2AK1Q9BQI3 630 aaKnown RBP14.86□□□□□ -0.03
PRKCB-201ENST00000303531 KRT10P13645 584 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 SEPT12Q8IYM1 358 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 GIMAP8Q8ND71 665 aaPredicted RBP14.85□□□□□ -0.03
PRKCB-201ENST00000303531 NSUN6Q8TEA1 469 aaKnown RBP14.85□□□□□ -0.03
PRKCB-201ENST00000303531 GABBR1Q9UBS5 961 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 LMNAP02545 664 aaKnown RBP14.85□□□□□ -0.03
PRKCB-201ENST00000303531 BRAFP15056 766 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 NFX1Q12986 1120 aaKnown RBP14.85□□□□□ -0.03
PRKCB-201ENST00000303531 GPS1Q13098 491 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 MMS22LQ6ZRQ5 1243 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 NLRP14Q86W24 1093 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 ATP6V1G3Q96LB4 118 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 ZNF302Q9NR11 478 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 CSPG5O95196 566 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 SFNP31947 248 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 PDCD2Q16342 344 aaPredicted RBP14.85□□□□□ -0.03
PRKCB-201ENST00000303531 SWSAP1Q6NVH7 229 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 ATG9AQ7Z3C6 839 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 LCA5Q86VQ0 697 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 FBXL13Q8NEE6 735 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 WNT8AQ9H1J5 351 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 M0QYV0 167 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 KCNB1Q14721 858 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.85□□□□□ -0.03
PRKCB-201ENST00000303531 VPS11Q9H270 941 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 IP6K2Q9UHH9 426 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 PHKA2P46019 1235 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 CYP26B1Q9NR63 512 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 A2ML1A8K2U0 1454 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 CCDC195A0A1B0GUA6 201 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 ATP5HO75947 161 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 SEMA3FQ13275 785 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 TGS1Q96RS0 853 aaKnown RBP14.85□□□□□ -0.03
PRKCB-201ENST00000303531 RNF146Q9NTX7 359 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 ZHX2Q9Y6X8 837 aa14.85□□□□□ -0.03
PRKCB-201ENST00000303531 FAM187AA6NFU0 413 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 ZC3H18Q86VM9 953 aaKnown RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 RFFLQ8WZ73 363 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 SLITRK6Q9H5Y7 841 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 EMSYQ7Z589 1322 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 PODNQ7Z5L7 613 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 PPM1NQ8N819 430 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 CCDC124Q96CT7 223 aaKnown RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 SNF8Q96H20 258 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 FAM84BQ96KN1 310 aaPredicted RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 HOXC10Q9NYD6 342 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 DCTN4Q9UJW0 460 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 PSMC1P62191 440 aaKnown RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 POLR3FQ9H1D9 316 aaPredicted RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 KCNF1Q9H3M0 494 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 SMYD3Q9H7B4 428 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 TOPORSQ9NS56 1045 aaPredicted RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 BNIP3LO60238 219 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 ST13P4Q8IZP2 240 aaPredicted RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 SPATA4Q8NEY3 305 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms