RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CCDC188H7C350 402 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 NFIBO00712 420 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 CD19P15391 556 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 OSTNP61366 133 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 CDAN1Q8IWY9 1227 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 NEK9Q8TD19 979 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 AGPAT1Q99943 283 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 KLHL11Q9NVR0 708 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 AIPL1Q9NZN9 384 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 GINS2Q9Y248 185 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 ZBED4O75132 1171 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 CLTAP09496 248 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 CD58P19256 250 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 HSPA1LP34931 641 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 C18orf8Q96DM3 657 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 TBC1D31Q96DN5 1066 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 ELAC2Q9BQ52 826 aaKnown RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 NUP85Q9BW27 656 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 IMPG2Q9BZV3 1241 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 KCNH7Q9NS40 1196 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 DBR1Q9UK59 544 aaKnown RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 SUGT1Q9Y2Z0 365 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 MYH14Q7Z406 1995 aaKnown RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 MDH1P40925 334 aaKnown RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 MCTP2Q6DN12 878 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 GANQ9H2C0 597 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 TOPORSQ9NS56 1045 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 C1orf112Q9NSG2 853 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 CNOT8Q9UFF9 292 aaKnown RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 AJAP1Q9UKB5 411 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 EXOC7Q9UPT5 735 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 STK38LQ9Y2H1 464 aa17.13■□□□□ 0.33
SMAD6-201ENST00000288840 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.13■□□□□ 0.33
SMAD6-201ENST00000288840 HNRNPH3P31942 346 aaKnown RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 FLT3P36888 993 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 SPP2Q13103 211 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 DCUN1D2Q6PH85 259 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 CCDC137Q6PK04 289 aaKnown RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 IRF2BP2Q7Z5L9 587 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 THAP12O43422 761 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 KRT19P08727 400 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 MFAP3P55082 362 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 GPC5P78333 572 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 CBWD2Q8IUF1 395 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 DHX38Q92620 1227 aaKnown RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 FZD1Q9UP38 647 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 COMTP21964 271 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 QARSP47897 775 aaKnown RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 STRN3Q13033 797 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 EPHA7Q15375 998 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 INTS8Q75QN2 995 aaKnown RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 ZNF473Q8WTR7 871 aaKnown RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 TCP11Q8WWU5 503 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 PPP1R16BQ96T49 567 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 HSPBP1Q9NZL4 362 aa17.12■□□□□ 0.33
SMAD6-201ENST00000288840 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
SMAD6-201ENST00000288840 F8VZ95 297 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 CLDN3O15551 220 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 PJA2O43164 708 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 SGPL1O95470 568 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 AARSP49588 968 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMAD6-201ENST00000288840 ACTN3Q08043 901 aaPredicted RBP17.11■□□□□ 0.33
SMAD6-201ENST00000288840 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 CPA5Q8WXQ8 436 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
SMAD6-201ENST00000288840 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 MYH3P11055 1940 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 POC1B-GALNT4F8VUJ3 575 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 TTLL12Q14166 644 aaPredicted RBP17.11■□□□□ 0.33
SMAD6-201ENST00000288840 OTOP1Q7RTM1 612 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 ZNF720Q7Z2F6 126 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 ZNF564Q8TBZ8 553 aaPredicted RBP17.11■□□□□ 0.33
SMAD6-201ENST00000288840 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMAD6-201ENST00000288840 DYNLT1P63172 113 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 ZCWPW2Q504Y3 356 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 SEZ6Q53EL9 994 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 SEPT14Q6ZU15 432 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 SH3BP5LQ7L8J4 393 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 ETNPPLQ8TBG4 499 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 FBXO25Q8TCJ0 367 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 C11orf70Q9BRQ4 267 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 ISCUQ9H1K1 167 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 TMEM206Q9H813 350 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 BCL9LQ86UU0 1499 aa17.11■□□□□ 0.33
SMAD6-201ENST00000288840 GMNCA6NCL1 334 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 MMEP08473 750 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 YWHABP31946 246 aaKnown RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 CORO7P57737 925 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 SWSAP1Q6NVH7 229 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 RNF25Q96BH1 459 aaPredicted RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 P2RX7Q99572 595 aaKnown RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms