RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
TPM1-202ENST00000288398 KRT2P35908 639 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 NCBP1Q09161 790 aaKnown RBP15.7■□□□□ 0.1
TPM1-202ENST00000288398 TRIM29Q14134 588 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 GIT2Q14161 759 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 NOMO2Q5JPE7 1267 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 TMEM184AQ6ZMB5 413 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 HFE2Q6ZVN8 426 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 MRPL43Q8N983 215 aaKnown RBP15.7■□□□□ 0.1
TPM1-202ENST00000288398 VN1R2Q8NFZ6 395 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 PBXIP1Q96AQ6 731 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 FAM193BQ96PV7 902 aaPredicted RBP15.7■□□□□ 0.1
TPM1-202ENST00000288398 LXNQ9BS40 222 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 TRAIPQ9BWF2 469 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 GBP3Q9H0R5 595 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 KCNMB3Q9NPA1 279 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 STK39Q9UEW8 545 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 NR2E1Q9Y466 385 aa15.7■□□□□ 0.1
TPM1-202ENST00000288398 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.69■□□□□ 0.1
TPM1-202ENST00000288398 TMEM221A6NGB7 291 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 NT5C1B-RDH14C9J2C7 533 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 M0R296 226 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 EML1O00423 815 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 ERLIN2O94905 339 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 CXCL14O95715 111 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 YWHABP31946 246 aaKnown RBP15.69■□□□□ 0.1
TPM1-202ENST00000288398 NPEPPSP55786 919 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 ANAPC15P60006 121 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 EPHA7Q15375 998 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 NPY5RQ15761 445 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 XKR9Q5GH70 373 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 TRIM67Q6ZTA4 783 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 SRGAP1Q7Z6B7 1085 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 KSR1Q8IVT5 923 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 VPS52Q8N1B4 723 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 LPPQ93052 612 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 NECTIN4Q96NY8 510 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 ZSWIM4Q9H7M6 989 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 BMP2KQ9NSY1 1161 aaPredicted RBP15.69■□□□□ 0.1
TPM1-202ENST00000288398 VAV3Q9UKW4 847 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 TPCN1Q9ULQ1 816 aa15.69■□□□□ 0.1
TPM1-202ENST00000288398 C2orf71A6NGG8 1288 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 ASAP2O43150 1006 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 STBD1O95210 358 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 ZXDAP98168 799 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 ITIH3Q06033 890 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 EMC2Q15006 297 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 C4orf19Q8IY42 314 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 PRPF31Q8WWY3 499 aaKnown RBP15.68■□□□□ 0.1
TPM1-202ENST00000288398 SUSD6Q92537 303 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 TMEM143Q96AN5 459 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 RIPOR3Q96MK2 946 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 CEP89Q96ST8 783 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 AGPAT5Q9NUQ2 364 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 DZANK1Q9NVP4 752 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 PCDHB2Q9Y5E7 798 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 HCFC2Q9Y5Z7 792 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 WDR81Q562E7 1941 aa15.68■□□□□ 0.1
TPM1-202ENST00000288398 ZNF623O75123 536 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 SP100P23497 879 aaPredicted RBP15.67■□□□□ 0.1
TPM1-202ENST00000288398 CYP4A11Q02928 519 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 LAMTOR4Q0VGL1 99 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 TFDP1Q14186 410 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 TPH2Q8IWU9 490 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 RNF149Q8NC42 400 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 OXER1Q8TDS5 423 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 DYDC2Q96IM9 177 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 MTRQ99707 1265 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 RSAD1Q9HA92 442 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 TBC1D13Q9NVG8 400 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 KANSL3Q9P2N6 904 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 CNTNAP2Q9UHC6 1331 aa15.67■□□□□ 0.1
TPM1-202ENST00000288398 CLASP2O75122 1294 aaKnown RBP15.66■□□□□ 0.1
TPM1-202ENST00000288398 MTHFRP42898 656 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 AK2P54819 239 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 CTTNQ14247 550 aaKnown RBP15.66■□□□□ 0.1
TPM1-202ENST00000288398 MXD4Q14582 209 aaPredicted RBP15.66■□□□□ 0.1
TPM1-202ENST00000288398 CALCRLQ16602 461 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 PTPN21Q16825 1174 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 SYCE2Q6PIF2 218 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 DDX53Q86TM3 631 aaKnown RBP15.66■□□□□ 0.1
TPM1-202ENST00000288398 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 HACE1Q8IYU2 909 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 CNNM3Q8NE01 707 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 IGSF21Q96ID5 467 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 FBXL18Q96ME1 805 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 PRRX2Q99811 253 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 EMILIN2Q9BXX0 1053 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 S1PR5Q9H228 398 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 ADAM7Q9H2U9 754 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 DHX33Q9H6R0 707 aaKnown RBP15.66■□□□□ 0.1
TPM1-202ENST00000288398 IFT122Q9HBG6 1241 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 UBN1Q9NPG3 1134 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 RGL1Q9NZL6 768 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 PCDHA12Q9UN75 941 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 MUC6Q6W4X9 2439 aa15.66■□□□□ 0.1
TPM1-202ENST00000288398 C5orf42Q9H799 3197 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms