RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 ESYT3A0FGR9 886 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 SOX5P35711 763 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 SLC12A1Q13621 1099 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 PDIA5Q14554 519 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 NAA30Q147X3 362 aaPredicted RBP10.9□□□□□ -0.66
LAMA3-201ENST00000269217 FAM47EQ6ZV65 393 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 TTLL6Q8N841 843 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 NSUN6Q8TEA1 469 aaKnown RBP10.9□□□□□ -0.66
LAMA3-201ENST00000269217 TRIM15Q9C019 465 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 INTUQ9ULD6 942 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 LRFN2Q9ULH4 789 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 APOBEC2Q9Y235 224 aaKnown RBP10.9□□□□□ -0.66
LAMA3-201ENST00000269217 ITIH6Q6UXX5 1313 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 SETBP1Q9Y6X0 1596 aa10.9□□□□□ -0.66
LAMA3-201ENST00000269217 KPNA7A9QM74 516 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 SLC4A1P02730 911 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 PMLP29590 882 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 SCARF1Q14162 830 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 CATSPER4Q7RTX7 472 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 NLRP14Q86W24 1093 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 ST13P4Q8IZP2 240 aaPredicted RBP10.9□□□□□ -0.67
LAMA3-201ENST00000269217 MTRQ99707 1265 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 ZFP69BQ9UJL9 534 aa10.9□□□□□ -0.67
LAMA3-201ENST00000269217 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.9□□□□□ -0.67
LAMA3-201ENST00000269217 NVLO15381 856 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 APOEP02649 317 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 KRT7P08729 469 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 MMP10P09238 476 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 FCER1AP12319 257 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PHKA2P46019 1235 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 RHOT1Q8IXI2 618 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 SPATA4Q8NEY3 305 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 WDR24Q96S15 920 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PLA2G12BQ9BX93 195 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 TSPOAP1O95153 1857 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PFDN1O60925 122 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 GPC3P51654 580 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 OCRLQ01968 901 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PDCD2Q16342 344 aaPredicted RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 GRAMD1BQ3KR37 738 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 SLC27A3Q5K4L6 730 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 ANKRD40Q6AI12 368 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 DPF2Q92785 391 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 SNF8Q96H20 258 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 MRPL46Q9H2W6 279 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 RAVER2Q9HCJ3 691 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 TOPORSQ9NS56 1045 aaPredicted RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 DDX56Q9NY93 547 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PXDNLA1KZ92 1463 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 BRAFP15056 766 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 ADRA2BP18089 450 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 ZNF568Q3ZCX4 644 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 TDRD3Q9H7E2 651 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 UBN1Q9NPG3 1134 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 HOXC10Q9NYD6 342 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 KLHL8Q9P2G9 620 aaPredicted RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 ZNF609O15014 1411 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 F5H6K3 240 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PDXKO00764 312 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 GNA15P30679 374 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 GUCY1A2P33402 732 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PAPOLAP51003 745 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PSMC5P62195 406 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 CCZ1BP86790 482 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 CCZ1P86791 482 aaPredicted RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 KLRC3Q07444 240 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 E2F4Q16254 413 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 CCDC137Q6PK04 289 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 TRIM59Q8IWR1 403 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 SRBD1Q8N5C6 995 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 FGD4Q96M96 766 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 EIF2AK1Q9BQI3 630 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 LXNQ9BS40 222 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PHF20Q9BVI0 1012 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 C2orf40Q9H1Z8 148 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 EPC1Q9H2F5 836 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PNMA3Q9UL41 463 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 PPARGP37231 505 aaPredicted RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 STAT3P40763 770 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 THOC1Q96FV9 657 aaKnown RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 FAM84BQ96KN1 310 aaPredicted RBP10.89□□□□□ -0.67
LAMA3-201ENST00000269217 CENPKQ9BS16 269 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 SNX12Q9UMY4 172 aa10.89□□□□□ -0.67
LAMA3-201ENST00000269217 HAUS5O94927 633 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 CIITAP33076 1130 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 EPHB1P54762 984 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 MTF1Q14872 753 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 GLYCTKQ8IVS8 523 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 TRIM9Q9C026 710 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 KCNF1Q9H3M0 494 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 FAM8A1Q9UBU6 413 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 SLC16A3O15427 465 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 EYA4O95677 639 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 INPP1P49441 399 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 DALRD3Q5D0E6 543 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 STAG2Q8N3U4 1231 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms