RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 STK36Q9NRP7 1315 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 TMEM221A6NGB7 291 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 M0R296 226 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
TRAF4-202ENST00000262396 FOSBP53539 338 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 PPP2R5CQ13362 524 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 GIT2Q14161 759 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 EPHA7Q15375 998 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 TRIM67Q6ZTA4 783 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 ANO5Q75V66 913 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 SLC39A11Q8N1S5 342 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 MRPL43Q8N983 215 aaKnown RBP13.68□□□□□ -0.22
TRAF4-202ENST00000262396 TMEM143Q96AN5 459 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 RIPOR3Q96MK2 946 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 LXNQ9BS40 222 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 ZSWIM4Q9H7M6 989 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 PPME1Q9Y570 386 aa13.68□□□□□ -0.22
TRAF4-202ENST00000262396 LOC730098B7Z3J9 87 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 M0R2N6 131 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 EML1O00423 815 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 TBX3O15119 743 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 ASAP2O43150 1006 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 EDIL3O43854 480 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 GAS2O43903 313 aaKnown RBP13.67□□□□□ -0.22
TRAF4-202ENST00000262396 PFKFB2O60825 505 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 NR1I2O75469 434 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 ZXDAP98168 799 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 CYP4A11Q02928 519 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 TFDP1Q14186 410 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 CTTNQ14247 550 aaKnown RBP13.67□□□□□ -0.22
TRAF4-202ENST00000262396 CALCRLQ16602 461 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 SRGAP1Q7Z6B7 1085 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 ALYREFQ86V81 257 aaKnown RBP13.67□□□□□ -0.22
TRAF4-202ENST00000262396 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 RNF149Q8NC42 400 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
TRAF4-202ENST00000262396 DYDC2Q96IM9 177 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 MBOAT7Q96N66 472 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 NECTIN4Q96NY8 510 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 MTRQ99707 1265 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 EMILIN2Q9BXX0 1053 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 TRIM6Q9C030 488 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-202ENST00000262396 KCNH6Q9H252 994 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 KANSL3Q9P2N6 904 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 STK39Q9UEW8 545 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
TRAF4-202ENST00000262396 IGKV6-21A0A0C4DH24 114 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 C2orf71A6NGG8 1288 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 ALDH2P05091 517 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAF4-202ENST00000262396 AK2P54819 239 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 ANAPC15P60006 121 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 ITIH3Q06033 890 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 LAMTOR4Q0VGL1 99 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 EMC2Q15006 297 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAF4-202ENST00000262396 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 ATAT1Q5SQI0 421 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 RARS2Q5T160 578 aaKnown RBP13.66□□□□□ -0.22
TRAF4-202ENST00000262396 ELMSAN1Q6PJG2 1045 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 ZNF598Q86UK7 904 aaKnown RBP13.66□□□□□ -0.22
TRAF4-202ENST00000262396 CABP7Q86V35 215 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 VN1R2Q8NFZ6 395 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 RSAD1Q9HA92 442 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 UBN1Q9NPG3 1134 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 TBC1D13Q9NVG8 400 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 DZANK1Q9NVP4 752 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 DBR1Q9UK59 544 aaKnown RBP13.66□□□□□ -0.22
TRAF4-202ENST00000262396 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 FAN1Q9Y2M0 1017 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 HCFC2Q9Y5Z7 792 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 KIAA1671Q9BY89 1806 aa13.66□□□□□ -0.22
TRAF4-202ENST00000262396 INO80B-WBP1J3KQ70 363 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 DTNBO60941 627 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 CLASP2O75122 1294 aaKnown RBP13.65□□□□□ -0.22
TRAF4-202ENST00000262396 ITGA4P13612 1032 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 ATP2B1P20020 1258 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 KLRC2P26717 231 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-202ENST00000262396 MTHFRP42898 656 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
TRAF4-202ENST00000262396 MXD4Q14582 209 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-202ENST00000262396 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 TMEM184AQ6ZMB5 413 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 PPFIBP1Q86W92 1011 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 CNNM3Q8NE01 707 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 AUTS2Q8WXX7 1259 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 FBXL18Q96ME1 805 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 PRRX2Q99811 253 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 TRAIPQ9BWF2 469 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms