RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 SP110Q9HB58 689 aa13□□□□□ -0.33
SPG11-201ENST00000261866 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
SPG11-201ENST00000261866 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
SPG11-201ENST00000261866 GGPS1O95749 300 aa13□□□□□ -0.33
SPG11-201ENST00000261866 KIAA1755Q5JYT7 1200 aa13□□□□□ -0.33
SPG11-201ENST00000261866 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
SPG11-201ENST00000261866 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
SPG11-201ENST00000261866 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 PPFIA2O75334 1257 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 SEPT5Q99719 369 aaPredicted RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 ADAM33Q9BZ11 813 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 INTS2Q9H0H0 1204 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 NSUN4Q96CB9 384 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 HVCN1Q96D96 273 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 CCT5P48643 541 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 STAT5BP51692 787 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 FAM180AQ6UWF9 173 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 SDCCAG3Q96C92 435 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 SLC7A5P2Q9GIP4 190 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 DHX35Q9H5Z1 703 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 MLXIPLQ9NP71 852 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 MYOZ2Q9NPC6 264 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 CDC23Q9UJX2 597 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 JCADQ9P266 1359 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 MB21D2Q8IYB1 491 aaPredicted RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 NR1H4Q96RI1 486 aaPredicted RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 TADA2AO75478 443 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 POU5F1BQ06416 359 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 CCDC157Q569K6 752 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 HIPK4Q8NE63 616 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 OSBPL5Q9H0X9 879 aaPredicted RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 UBA6A0AVT1 1052 aaPredicted RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 ATP6V1E1P36543 226 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 DRP2Q13474 957 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 LRRC31Q6UY01 552 aa12.99□□□□□ -0.33
SPG11-201ENST00000261866 NOVA2Q9UNW9 492 aaKnown RBP12.99□□□□□ -0.33
SPG11-201ENST00000261866 CFAP69A5D8W1 941 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 RWDD2BP57060 319 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 LRRC63Q05C16 580 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 SNAPC2Q13487 334 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 FAM102AQ5T9C2 384 aaPredicted RBP12.98□□□□□ -0.33
SPG11-201ENST00000261866 CDR2LQ86X02 465 aaPredicted RBP12.98□□□□□ -0.33
SPG11-201ENST00000261866 SEPT8Q92599 483 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 ASIC4Q96FT7 647 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 USP33Q8TEY7 942 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.98□□□□□ -0.33
SPG11-201ENST00000261866 PPP1R36Q96LQ0 422 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 NFU1Q9UMS0 254 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 EVI5O60447 810 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 ARHGAP25P42331 645 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 ZBED6P86452 979 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 YIPF2Q9BWQ6 316 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 SNX24Q9Y343 169 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 TTC4O95801 387 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 AGO2Q9UKV8 859 aaKnown RBP12.98□□□□□ -0.33
SPG11-201ENST00000261866 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 PRKCBP05771 671 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 IFT88Q13099 833 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 KNOP1Q1ED39 458 aaKnown RBP12.98□□□□□ -0.33
SPG11-201ENST00000261866 ATG9AQ7Z3C6 839 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 AGR3Q8TD06 166 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 GBP5Q96PP8 586 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 OCRLQ01968 901 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 COG2Q14746 738 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
SPG11-201ENST00000261866 ACAP3Q96P50 834 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 CLTCL1P53675 1640 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
SPG11-201ENST00000261866 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 BTBD8Q5XKL5 378 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 ARL6IP4Q66PJ3 421 aaKnown RBP12.97□□□□□ -0.33
SPG11-201ENST00000261866 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
SPG11-201ENST00000261866 SNX19Q92543 992 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 EMSYQ7Z589 1322 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 ASB14A6NK59 587 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 IKBKBO14920 756 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
SPG11-201ENST00000261866 NDFIP2Q9NV92 336 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 NNMTP40261 264 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
SPG11-201ENST00000261866 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 ENOX1Q8TC92 643 aaKnown RBP12.97□□□□□ -0.33
SPG11-201ENST00000261866 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 VPS11Q9H270 941 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 GLI2P10070 1586 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 ALCAMQ13740 583 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 VPS72Q15906 364 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 PIP4K2CQ8TBX8 421 aa12.97□□□□□ -0.33
SPG11-201ENST00000261866 SH3KBP1Q96B97 665 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms