RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 STILQ15468 1287 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 CRY2Q49AN0 593 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 NAA35Q5VZE5 725 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 RNF149Q8NC42 400 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 URGCPQ8TCY9 931 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 HSPBP1Q9NZL4 362 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.1■□□□□ 0.17
UBE4B-201ENST00000253251 IGSF9BQ9UPX0 1349 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 RRN3P2A6NIE6 340 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 ZNF157P51786 506 aaPredicted RBP16.09■□□□□ 0.17
UBE4B-201ENST00000253251 RPUSD2Q8IZ73 545 aaKnown RBP16.09■□□□□ 0.17
UBE4B-201ENST00000253251 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 MSH4O15457 936 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 CRCPO75575 148 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 VPS41P49754 854 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 PRKCEQ02156 737 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 STK4Q13043 487 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 PTPROQ16827 1216 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 APOBEC3HQ6NTF7 200 aaKnown RBP16.09■□□□□ 0.17
UBE4B-201ENST00000253251 TMEM270Q6UE05 265 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 ADAT2Q7Z6V5 191 aaKnown RBP16.09■□□□□ 0.17
UBE4B-201ENST00000253251 TRIM62Q9BVG3 475 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 LRRD1A4D1F6 860 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 TJP3O95049 919 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 CYP11B2P19099 503 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 STX2P32856 288 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 GIMAP7Q8NHV1 300 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 MRRFQ96E11 262 aaKnown RBP16.09■□□□□ 0.17
UBE4B-201ENST00000253251 ERAP1Q9NZ08 941 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 GRID2IPA4D2P6 1211 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 CXCL11O14625 94 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 ARHGAP25P42331 645 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 C9orf131Q5VYM1 1079 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 USP49Q70CQ1 688 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 PPP1R16BQ96T49 567 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 STK33Q9BYT3 514 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 EPB41L5Q9HCM4 733 aa16.09■□□□□ 0.17
UBE4B-201ENST00000253251 A0A1W2PQJ5 194 aa16.08■□□□□ 0.17
UBE4B-201ENST00000253251 PSMA2P25787 234 aa16.08■□□□□ 0.17
UBE4B-201ENST00000253251 IFRD2Q12894 506 aaPredicted RBP16.08■□□□□ 0.17
UBE4B-201ENST00000253251 GPC2Q8N158 579 aa16.08■□□□□ 0.17
UBE4B-201ENST00000253251 PPME1Q9Y570 386 aa16.08■□□□□ 0.17
UBE4B-201ENST00000253251 TSPY1Q01534 308 aa16.08■□□□□ 0.16
UBE4B-201ENST00000253251 NR1I3Q14994 352 aa16.08■□□□□ 0.16
UBE4B-201ENST00000253251 PRMT7Q9NVM4 692 aaPredicted RBP16.08■□□□□ 0.16
UBE4B-201ENST00000253251 ATRNO75882 1429 aa16.08■□□□□ 0.16
UBE4B-201ENST00000253251 ZBTB24O43167 697 aaPredicted RBP16.08■□□□□ 0.16
UBE4B-201ENST00000253251 EMBQ6PCB8 327 aa16.08■□□□□ 0.16
UBE4B-201ENST00000253251 SPATS2Q86XZ4 545 aaKnown RBP16.08■□□□□ 0.16
UBE4B-201ENST00000253251 SAAL1Q96ER3 474 aa16.08■□□□□ 0.16
UBE4B-201ENST00000253251 ACAP3Q96P50 834 aa16.08■□□□□ 0.16
UBE4B-201ENST00000253251 PARP4Q9UKK3 1724 aaKnown RBP16.07■□□□□ 0.16
UBE4B-201ENST00000253251 IL18RAPO95256 599 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 PKN1Q16512 942 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 BSPRYQ5W0U4 402 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 LRP10Q7Z4F1 713 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 CCDC13Q8IYE1 715 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 TAAR1Q96RJ0 339 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 ANAPC7Q9UJX3 599 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 ANAPC5Q9UJX4 755 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 EIF3BP55884 814 aaKnown RBP16.07■□□□□ 0.16
UBE4B-201ENST00000253251 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.164e-6■■□□□ 13.4
UBE4B-201ENST00000253251 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 ZRANB2O95218 330 aaKnown RBP eCLIP16.07■□□□□ 0.167e-6■■■■■ 37.3
UBE4B-201ENST00000253251 TROVE2P10155 538 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBE4B-201ENST00000253251 GNA15P30679 374 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 EPHX2P34913 555 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 ECE1P42892 770 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 CCDC144BQ3MJ40 725 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 PCNX4Q63HM2 1172 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 RBM43Q6ZSC3 357 aaKnown RBP16.07■□□□□ 0.16
UBE4B-201ENST00000253251 GSDMBQ8TAX9 411 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 RFFLQ8WZ73 363 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 CALN1Q9BXU9 219 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 VIL1P09327 827 aaKnown RBP16.07■□□□□ 0.16
UBE4B-201ENST00000253251 DR1Q01658 176 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 CABS1Q96KC9 395 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 IP6K2Q9UHH9 426 aa16.07■□□□□ 0.16
UBE4B-201ENST00000253251 PALMO75781 387 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 RPLP2P05387 115 aaKnown RBP16.06■□□□□ 0.16
UBE4B-201ENST00000253251 FMO5P49326 533 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 HUNKP57058 714 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 VPS52Q8N1B4 723 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 MKL1Q969V6 931 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 SART1O43290 800 aaKnown RBP16.06■□□□□ 0.16
UBE4B-201ENST00000253251 ARHGAP24Q8N264 748 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 FBXO41Q8TF61 875 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 CFAP57Q96MR6 1250 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 WNT8AQ9H1J5 351 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 SEPT10Q9P0V9 454 aa16.06■□□□□ 0.16
UBE4B-201ENST00000253251 CPSF3Q9UKF6 684 aaKnown RBP16.06■□□□□ 0.16
UBE4B-201ENST00000253251 BCL9LQ86UU0 1499 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms