RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 UNC45AQ9H3U1 944 aa18.31■□□□□ 0.52
ACTN4-201ENST00000252699 NGRNQ9NPE2 291 aaKnown RBP18.31■□□□□ 0.52
ACTN4-201ENST00000252699 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
ACTN4-201ENST00000252699 GH1P01241 217 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 FGGP02679 453 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 ANKRD42Q8N9B4 389 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 ANO9A1A5B4 782 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 FTLP02792 175 aaPredicted RBP18.3■□□□□ 0.52
ACTN4-201ENST00000252699 EPHX2P34913 555 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 EPHB4P54760 987 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
ACTN4-201ENST00000252699 RNF10Q8N5U6 811 aaKnown RBP18.3■□□□□ 0.52
ACTN4-201ENST00000252699 PDE11AQ9HCR9 933 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 ANKEF1Q9NU02 776 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 AGPAT5Q9NUQ2 364 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 CYTH3O43739 400 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 SOX5P35711 763 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 GABPAQ06546 454 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 PLCD3Q8N3E9 789 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 KCTD6Q8NC69 237 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 CYP2B6P20813 491 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 HOXD10P28358 340 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 GABPB1Q06547 395 aaPredicted RBP18.3■□□□□ 0.52
ACTN4-201ENST00000252699 ENOSF1Q7L5Y1 443 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 MGARPQ8TDB4 240 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 FAM198AQ9UFP1 575 aa18.3■□□□□ 0.52
ACTN4-201ENST00000252699 ARL4AP40617 200 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 KSR1Q8IVT5 923 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 KBTBD4Q9NVX7 518 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 XRN1Q8IZH2 1706 aaKnown RBP18.29■□□□□ 0.52
ACTN4-201ENST00000252699 MRIQ9BWK5 157 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 MIF4GDA9UHW6 222 aaKnown RBP18.29■□□□□ 0.52
ACTN4-201ENST00000252699 HUS1O60921 280 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 PSMA2P25787 234 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 FMO5P49326 533 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 CCDC6Q16204 474 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 FKBP1CQ5VVH2 108 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 B4GALNT4Q76KP1 1039 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 KIAA1683Q9H0B3 1180 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 MED4Q9NPJ6 270 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 MCF2LO15068 1137 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 KIAA0391O15091 583 aaKnown RBP18.29■□□□□ 0.52
ACTN4-201ENST00000252699 TAL1P17542 331 aaPredicted RBP18.29■□□□□ 0.52
ACTN4-201ENST00000252699 SLC7A5Q01650 507 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 MAD1L1Q9Y6D9 718 aa18.29■□□□□ 0.52
ACTN4-201ENST00000252699 GNA15P30679 374 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ACTR2P61160 394 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 SNRNP35Q16560 246 aaKnown RBP18.28■□□□□ 0.52
ACTN4-201ENST00000252699 CDO1Q16878 200 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 FYB2Q5VWT5 728 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 RDM1Q8NG50 284 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 TBC1D31Q96DN5 1066 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 KCNF1Q9H3M0 494 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 HOMER3Q9NSC5 361 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ITIH6Q6UXX5 1313 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ACTN1P12814 892 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ZNF18P17022 549 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 MRPS25P82663 173 aaKnown RBP18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ITKQ08881 620 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 CCNYQ8ND76 341 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 PPP2R3BQ9Y5P8 575 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 CCZ1BP86790 482 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 CCZ1P86791 482 aaPredicted RBP18.28■□□□□ 0.52
ACTN4-201ENST00000252699 SF3A3Q12874 501 aaKnown RBP eCLIP18.28■□□□□ 0.523e-7■■□□□ 14
ACTN4-201ENST00000252699 MAP3K20Q9NYL2 800 aaKnown RBP18.28■□□□□ 0.52
ACTN4-201ENST00000252699 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ATP8A1Q9Y2Q0 1164 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 GOLGA8KD6RF30 607 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 EIF3DO15371 548 aaKnown RBP eCLIP18.28■□□□□ 0.52
ACTN4-201ENST00000252699 UCHL3P15374 230 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 ILDR1Q86SU0 546 aaPredicted RBP18.28■□□□□ 0.52
ACTN4-201ENST00000252699 CCDC110Q8TBZ0 833 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 RUSC1Q9BVN2 902 aa18.28■□□□□ 0.52
ACTN4-201ENST00000252699 LTN1O94822 1766 aa18.27■□□□□ 0.52
ACTN4-201ENST00000252699 HGSO14964 777 aaPredicted RBP18.27■□□□□ 0.52
ACTN4-201ENST00000252699 RFC5P40937 340 aa18.27■□□□□ 0.52
ACTN4-201ENST00000252699 AP3M2P53677 418 aa18.27■□□□□ 0.52
ACTN4-201ENST00000252699 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.52
ACTN4-201ENST00000252699 VIL1P09327 827 aaKnown RBP18.27■□□□□ 0.52
ACTN4-201ENST00000252699 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
ACTN4-201ENST00000252699 STX2P32856 288 aa18.27■□□□□ 0.52
ACTN4-201ENST00000252699 GEN1Q17RS7 908 aa18.27■□□□□ 0.52
ACTN4-201ENST00000252699 MICALL1Q8N3F8 863 aa18.27■□□□□ 0.52
ACTN4-201ENST00000252699 ZRANB2O95218 330 aaKnown RBP eCLIP18.27■□□□□ 0.51
ACTN4-201ENST00000252699 APBA1Q02410 837 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.51
ACTN4-201ENST00000252699 TC2NQ8N9U0 490 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 SYTL5Q8TDW5 730 aaPredicted RBP18.27■□□□□ 0.51
ACTN4-201ENST00000252699 KIF12Q96FN5 646 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 ZWILCHQ9H900 591 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 CCDC188H7C350 402 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 MAGEB2O15479 319 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 CD44P16070 742 aaKnown RBP18.27■□□□□ 0.51
ACTN4-201ENST00000252699 SLC12A2P55011 1212 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 YWHAGP61981 247 aaKnown RBP eCLIP18.27■□□□□ 0.511e-6■□□□□ 9.4
ACTN4-201ENST00000252699 E4F1Q66K89 784 aaPredicted RBP18.27■□□□□ 0.51
ACTN4-201ENST00000252699 PCDHAC2Q9Y5I4 1007 aa18.27■□□□□ 0.51
ACTN4-201ENST00000252699 CALB1P05937 261 aa18.26■□□□□ 0.51
ACTN4-201ENST00000252699 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms