RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CATSPER3Q86XQ3 398 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 IWS1Q96ST2 819 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 FMO2Q99518 471 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 FOXP3Q9BZS1 431 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 CCDC113Q9H0I3 377 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 SERPINB13Q9UIV8 391 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 STX8Q9UNK0 236 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 JAG2Q9Y219 1238 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 CLDN10P78369 228 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ENPEPQ07075 957 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 PRPF4BQ13523 1007 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ALCAMQ13740 583 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 PPP1R7Q15435 360 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 QRICH1Q2TAL8 776 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 FYB2Q5VWT5 728 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 NAA35Q5VZE5 725 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 DAAM2Q86T65 1068 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ZDHHC14Q8IZN3 488 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 PLEKHO2Q8TD55 490 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ACTRT1Q8TDG2 376 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 HDAC7Q8WUI4 952 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TCP11Q8WWU5 503 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 KIFAP3Q92845 792 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 CD101Q93033 1021 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 COA7Q96BR5 231 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 CAMKK2Q96RR4 588 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 LRRC1Q9BTT6 524 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TRIM6Q9C030 488 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ATP6V0A4Q9HBG4 840 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 PANK4Q9NVE7 773 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 KCNG1Q9UIX4 513 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 NFU1Q9UMS0 254 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 FOSP01100 380 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ZNF76P36508 570 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 GUCY2FP51841 1108 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 RBM26Q5T8P6 1007 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 DCAF12L1Q5VU92 463 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ARHGEF18Q6ZSZ5 1173 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 OTOP1Q7RTM1 612 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 FRMD5Q7Z6J6 570 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 CLEC4DQ8WXI8 215 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TBC1D31Q96DN5 1066 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 JPH2Q9BR39 696 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TSPYL2Q9H2G4 693 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TMBIM4Q9HC24 238 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 SEPT11Q9NVA2 429 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TRPC5Q9UL62 973 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 DNM3Q9UQ16 869 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 GSTTP1A0A1W2PQM5 241 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 SLC16A3O15427 465 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 MSH4O15457 936 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ALAS1P13196 640 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 HSPA1LP34931 641 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 PRELPP51888 382 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 POLR2FP61218 127 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 EXOC3L4Q17RC7 722 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 CRELD2Q6UXH1 353 aaPredicted RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 PACS2Q86VP3 889 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 MYCBPAPQ8TBZ2 947 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 GJA10Q969M2 543 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 TRIM11Q96F44 468 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 ZIM3Q96PE6 472 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 MPHOSPH6Q99547 160 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 DHX36Q9H2U1 1008 aaKnown RBP4.48□□□□□ -1.69
UBE4A-201ENST00000252108 BAIAP2L1Q9UHR4 511 aa4.48□□□□□ -1.69
UBE4A-201ENST00000252108 DNAJC8O75937 253 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 MTA2O94776 668 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 FAM13AO94988 1023 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CHRNA3P32297 505 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SIX1Q15475 284 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SMYD5Q6GMV2 418 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 KRT26Q7Z3Y9 468 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 N4BP2L2Q92802 583 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 HVCN1Q96D96 273 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 UBA5Q9GZZ9 404 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SUCLA2Q9P2R7 463 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SAMM50Q9Y512 469 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 LRRC53A6NM62 1247 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 VIL1P09327 827 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 DESP17661 470 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 ABCD1P33897 745 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 TECP42680 631 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 TXKP42681 527 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 IRX4P78413 519 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 PREPLQ4J6C6 727 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 HERC4Q5GLZ8 1057 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 ANKRD35Q8N283 1001 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 USP38Q8NB14 1042 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 ATP8B4Q8TF62 1192 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CYFIP2Q96F07 1278 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 HES6Q96HZ4 224 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SGIP1Q9BQI5 828 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 TMEM106CQ9BVX2 250 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 USP40Q9NVE5 1235 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SAP30BPQ9UHR5 308 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 DMGDHQ9UI17 866 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 NOD1Q9Y239 953 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 NEU2Q9Y3R4 380 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 UBE4BO95155 1302 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms