RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 EPHX1P07099 455 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 CD247P20963 164 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 GUCY1A2P33402 732 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 ADMP35318 185 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 UBASH3AP57075 661 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 PNOCQ13519 176 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 DOC2BQ14184 412 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 POSTNQ15063 836 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 LONRF2Q1L5Z9 754 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 ARMCX5Q6P1M9 558 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 ZNF765Q7L2R6 523 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 PDCL2Q8N4E4 241 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 SPATA20Q8TB22 786 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 THAP3Q8WTV1 239 aaPredicted RBP8.88□□□□□ -0.99
CXCR4-201ENST00000241393 PPP1R14AQ96A00 147 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 FERMT2Q96AC1 680 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 PHF20Q9BVI0 1012 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 ANKRD2Q9GZV1 360 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 AATFQ9NY61 560 aaKnown RBP eCLIP8.88□□□□□ -0.99
CXCR4-201ENST00000241393 MINPP1Q9UNW1 487 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 DIS3Q9Y2L1 958 aaKnown RBP8.88□□□□□ -0.99
CXCR4-201ENST00000241393 FHOD1Q9Y613 1164 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 TRIM75PA6NK02 468 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 KRT2P35908 639 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 GYG1P46976 350 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 TRAPPC10P48553 1259 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 NCBP1Q09161 790 aaKnown RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 SLC10A6Q3KNW5 377 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 SBK1Q52WX2 424 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 IFIT1BQ5T764 474 aaKnown RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 MRM1Q6IN84 353 aaKnown RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 SDE2Q6IQ49 451 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 ADGRA1Q86SQ6 560 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 FOXP4Q8IVH2 680 aaPredicted RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 VSTM4Q8IW00 320 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 ENAHQ8N8S7 591 aaPredicted RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 DTWD2Q8NBA8 298 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 NUP133Q8WUM0 1156 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 SMARCE1Q969G3 411 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 FAM84BQ96KN1 310 aaPredicted RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 PYM1Q9BRP8 204 aaKnown RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 TMX1Q9H3N1 280 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 ATP8A2Q9NTI2 1148 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 GPATCH2Q9NW75 528 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 CGNQ9P2M7 1197 aaKnown RBP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 ABCF2Q9UG63 623 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 KCNJ14Q9UNX9 436 aa8.87□□□□□ -0.99
CXCR4-201ENST00000241393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.87□□□□□ -0.99
CXCR4-201ENST00000241393 MAST2Q6P0Q8 1798 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 COL24A1Q17RW2 1714 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 FAM170BA6NMN3 283 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 USP27XA6NNY8 438 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 SERPINC1P01008 464 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 F13BP05160 661 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 ZNF18P17022 549 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 GSK3AP49840 483 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 TROAPQ12815 778 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 MORC3Q14149 939 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 PKN1Q16512 942 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 DCAF15Q66K64 600 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 E4F1Q66K89 784 aaPredicted RBP8.86□□□□□ -0.99
CXCR4-201ENST00000241393 TMTC3Q6ZXV5 915 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 FAM177A1Q8N128 213 aaPredicted RBP8.86□□□□□ -0.99
CXCR4-201ENST00000241393 SHKBP1Q8TBC3 707 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 SDR42E1Q8WUS8 393 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 ERO1AQ96HE7 468 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 RCC1LQ96I51 464 aaKnown RBP8.86□□□□□ -0.99
CXCR4-201ENST00000241393 FEZ1Q99689 392 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 SPATA9Q9BWV2 254 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 CRNKL1Q9BZJ0 848 aaKnown RBP8.86□□□□□ -0.99
CXCR4-201ENST00000241393 ARPP21Q9UBL0 812 aaPredicted RBP8.86□□□□□ -0.99
CXCR4-201ENST00000241393 ZMYM5Q9UJ78 669 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 MAN1B1Q9UKM7 699 aa8.86□□□□□ -0.99
CXCR4-201ENST00000241393 UBE2Q2LH0YL09 131 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 POLR2DO15514 142 aaKnown RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 ATP1A3P13637 1013 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 RPS8P62241 208 aaKnown RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CFAP100Q494V2 611 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 SPTY2D1Q68D10 685 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CWF19L1Q69YN2 538 aaKnown RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CTR9Q6PD62 1173 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 HOMER1Q86YM7 354 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 SMAP1Q8IYB5 467 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 LINC00116Q8NCU8 138 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 ZSWIM2Q8NEG5 633 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 SYTL5Q8TDW5 730 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 NSUN4Q96CB9 384 aaKnown RBP8.85□□□□□ -0.99
CXCR4-201ENST00000241393 PPP1R13BQ96KQ4 1090 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 L2HGDHQ9H9P8 463 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 ZNF451Q9Y4E5 1061 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 PCDHB6Q9Y5E3 794 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 MYH6P13533 1939 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 COL4A1P02462 1669 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 CCDC163A0A0D9SF12 145 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 GOLGA6L9A6NEM1 432 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 SIGLEC6O43699 453 aa8.85□□□□□ -0.99
CXCR4-201ENST00000241393 RPS6KA4O75676 772 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms