RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 TRIM59Q8IWR1 403 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.6■□□□□ 0.09
PRDM4-201ENST00000228437 RPS6KC1Q96S38 1066 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 IKZF4Q9H2S9 585 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 UBN1Q9NPG3 1134 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 PCDHA1Q9Y5I3 950 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 PODXLO00592 558 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 PPIP5K2O43314 1243 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 PPFIA2O75334 1257 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 ENTPD5O75356 428 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 FGFR2P21802 821 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 EPHB2P29323 1055 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 CDK8P49336 464 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 KNOP1Q1ED39 458 aaKnown RBP15.6■□□□□ 0.09
PRDM4-201ENST00000228437 SAYSD1Q9NPB0 183 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 CCDC87Q9NVE4 849 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 KDM3AQ9Y4C1 1321 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 ATP2A1O14983 1001 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 GCLMP48507 274 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 MARCKSL1P49006 195 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 ZC2HC1CQ53FD0 456 aaPredicted RBP15.6■□□□□ 0.09
PRDM4-201ENST00000228437 ODR4Q5SWX8 454 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 STXBP4Q6ZWJ1 553 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 C3orf20Q8ND61 904 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 SLC30A5Q8TAD4 765 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 SUGT1Q9Y2Z0 365 aa15.6■□□□□ 0.09
PRDM4-201ENST00000228437 PIAS1O75925 651 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 KCNA3P22001 575 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 CDR2Q01850 454 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 TCP10Q12799 353 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 SCFD2Q8WU76 684 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 CDC42EP4Q9H3Q1 356 aaKnown RBP15.59■□□□□ 0.09
PRDM4-201ENST00000228437 SUCLA2Q9P2R7 463 aaPredicted RBP15.59■□□□□ 0.09
PRDM4-201ENST00000228437 DDX3XO00571 662 aaKnown RBP eCLIP15.59■□□□□ 0.094e-10■■■■□ 19.5
PRDM4-201ENST00000228437 CIB2O75838 187 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 ATP4AP20648 1035 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 COMTP21964 271 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 PSMC2P35998 433 aaKnown RBP15.59■□□□□ 0.09
PRDM4-201ENST00000228437 GSTO1P78417 241 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 CADPS2Q86UW7 1296 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 KRT35Q92764 455 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 SETDB2Q96T68 719 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 DDX50Q9BQ39 737 aaKnown RBP15.59■□□□□ 0.09
PRDM4-201ENST00000228437 FAM187AA6NFU0 413 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 ASAP2O43150 1006 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 HNRNPH3P31942 346 aaKnown RBP15.59■□□□□ 0.09
PRDM4-201ENST00000228437 CHRNA3P32297 505 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 NT5DC3Q86UY8 548 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 ARHGEF26Q96DR7 871 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 IL17RBQ9NRM6 502 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
PRDM4-201ENST00000228437 GSTA1P08263 222 aa15.58■□□□□ 0.09
PRDM4-201ENST00000228437 PARP10Q53GL7 1025 aa15.58■□□□□ 0.09
PRDM4-201ENST00000228437 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.09
PRDM4-201ENST00000228437 SCFD1Q8WVM8 642 aa15.58■□□□□ 0.09
PRDM4-201ENST00000228437 RGL1Q9NZL6 768 aa15.58■□□□□ 0.09
PRDM4-201ENST00000228437 MYH13Q9UKX3 1938 aa15.58■□□□□ 0.09
PRDM4-201ENST00000228437 CHD2O14647 1828 aaKnown RBP15.58■□□□□ 0.09
PRDM4-201ENST00000228437 NVLO15381 856 aaKnown RBP15.58■□□□□ 0.08
PRDM4-201ENST00000228437 NOL4O94818 638 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 CFBP00751 764 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 HOXA13P31271 388 aaPredicted RBP15.58■□□□□ 0.08
PRDM4-201ENST00000228437 CTAGE3PQ8IX95 158 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 ZNF483Q8TF39 744 aaPredicted RBP15.58■□□□□ 0.08
PRDM4-201ENST00000228437 ZNF570Q96NI8 536 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 MMTAG2Q9BU76 263 aaKnown RBP15.58■□□□□ 0.08
PRDM4-201ENST00000228437 STOML1Q9UBI4 398 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 RABGAP1Q9Y3P9 1069 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.58■□□□□ 0.08
PRDM4-201ENST00000228437 DPPA5A6NC42 116 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 ESRRAP11474 423 aaPredicted RBP15.58■□□□□ 0.08
PRDM4-201ENST00000228437 SP4Q02446 784 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 PPP1R21Q6ZMI0 780 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 KLHL11Q9NVR0 708 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 TAS2R14Q9NYV8 317 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 GGA2Q9UJY4 613 aa15.58■□□□□ 0.08
PRDM4-201ENST00000228437 CCDC189A1A4V9 331 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 AKAP3O75969 853 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 PLS3P13797 630 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 SOX5P35711 763 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
PRDM4-201ENST00000228437 TTC8Q8TAM2 541 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 FAM161BQ96MY7 647 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 C2CD2Q9Y426 696 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 SLC4A7Q9Y6M7 1214 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 RIC1Q4ADV7 1423 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 SYNGAP1Q96PV0 1343 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 MAP3K7O43318 606 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 PHF2O75151 1096 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 IRX4P78413 519 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 KCNA1Q09470 495 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 RCN1Q15293 331 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 CNGA2Q16280 664 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 EPC2Q52LR7 807 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 SYCP2LQ5T4T6 812 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 ATXN2Q99700 1313 aaKnown RBP15.57■□□□□ 0.08
PRDM4-201ENST00000228437 MAPK4P31152 587 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 LAMB3Q13751 1172 aa15.57■□□□□ 0.08
PRDM4-201ENST00000228437 DHX34Q14147 1143 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms