RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PALLDQ8WX93 1383 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.09
TGFBR3-201ENST00000212355 NEMP1O14524 444 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 SPARCL1Q14515 664 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 RBBP7Q16576 425 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 AGAP3Q96P47 875 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 ATG3Q9NT62 314 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 KCNQ2O43526 872 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 ZNF667Q5HYK9 610 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 RNF168Q8IYW5 571 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 ACSF2Q96CM8 615 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 WRNIP1Q96S55 665 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 POLR3FQ9H1D9 316 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 SLC12A6Q9UHW9 1150 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 SUFUQ9UMX1 484 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 ERBB3P21860 1342 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 WDR17Q8IZU2 1322 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 RPAP1Q9BWH6 1393 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 H7C1W4 665 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 GPC3P51654 580 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 VSNL1P62760 191 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 LONRF1Q17RB8 773 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 PRAMEF18Q5VWM3 479 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 FBXW10Q5XX13 1052 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 CCDC33Q8N5R6 958 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 ESRRBO95718 433 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 NLRP14Q86W24 1093 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 MB21D2Q8IYB1 491 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 MARCOQ9UEW3 520 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 ANGPTL2Q9UKU9 493 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 TAF6LQ9Y6J9 622 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 EMSYQ7Z589 1322 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 LIFRP42702 1097 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 ATG16L1Q676U5 607 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 SRBD1Q8N5C6 995 aaKnown RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 DCP1AQ9NPI6 582 aaPredicted RBP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
TGFBR3-201ENST00000212355 CCDC137Q6PK04 289 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 CATSPER3Q86XQ3 398 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 LXNQ9BS40 222 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 UBA6A0AVT1 1052 aaPredicted RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 DRP2Q13474 957 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 CUL1Q13616 776 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 COBLL1Q53SF7 1204 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 ATP6V0A4Q9HBG4 840 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 AGPAT5Q9NUQ2 364 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 E2F6O75461 281 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 GRAP2O75791 330 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 ZRANB2O95218 330 aaKnown RBP eCLIP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 TWF2Q6IBS0 349 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 BBS5Q8N3I7 341 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 LIMA1Q9UHB6 759 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 STRIP2Q9ULQ0 834 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 PSMC1P62191 440 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 USP33Q8TEY7 942 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 EIF2AK1Q9BQI3 630 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 ZBTB7AO95365 584 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 RGS7P49802 495 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 KNOP1Q1ED39 458 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 IFT43Q96FT9 208 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 CEP19Q96LK0 163 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 KLC2Q9H0B6 622 aa14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 WARS2Q9UGM6 360 aaKnown RBP14.5□□□□□ -0.09
TGFBR3-201ENST00000212355 XPOTO43592 962 aaKnown RBP14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 KRT14P02533 472 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 BRAFP15056 766 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 KRT17Q04695 432 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 MXD4Q14582 209 aaPredicted RBP14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 DHX35Q9H5Z1 703 aaKnown RBP14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 ADGRG1Q9Y653 693 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 GSG1L2A8MUP6 293 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 ANP32DO95626 131 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 KDM5DQ9BY66 1539 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 ATP8B1O43520 1251 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 ARL4CP56559 192 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 ESRRGP62508 458 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 PPP2R2AP63151 447 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 TADA2BQ86TJ2 420 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 OTULINQ96BN8 352 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 TRIM55Q9BYV6 548 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 EHD2Q9NZN4 543 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 TRPC5Q9UL62 973 aaPredicted RBP14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 ENO1P06733 434 aaKnown RBP14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 VCPP55072 806 aaKnown RBP14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 KDSRQ06136 332 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 EPC2Q52LR7 807 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 GJB7Q6PEY0 223 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 TRIM42Q8IWZ5 723 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 SLC26A7Q8TE54 656 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 SNX19Q92543 992 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 NLRP1Q9C000 1473 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 BBOX1O75936 387 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 CCDC85BQ15834 202 aaPredicted RBP14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 KLC3Q6P597 504 aa14.49□□□□□ -0.09
TGFBR3-201ENST00000212355 TCP11X1B4DZS4 312 aa14.48□□□□□ -0.09
TGFBR3-201ENST00000212355 UBE2Q2LH0YL09 131 aa14.48□□□□□ -0.09
TGFBR3-201ENST00000212355 ACCSLQ4AC99 568 aa14.48□□□□□ -0.09
TGFBR3-201ENST00000212355 OSBPL1AQ9BXW6 950 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms