RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 DDX42Q86XP3 938 aaKnown RBP eCLIP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 PIK3R5Q8WYR1 880 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 EML4Q9HC35 981 aaKnown RBP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 PNMA6FA0A0J9YX94 578 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 PRKAB2O43741 272 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 HEATR6Q6AI08 1181 aaKnown RBP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 C1orf228Q6PIY5 440 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 PBXIP1Q96AQ6 731 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 ROR1Q01973 937 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 ZNF211Q13398 564 aaPredicted RBP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 THNSL1Q8IYQ7 743 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 DTNBP1Q96EV8 351 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 TAF1DQ9H5J8 278 aaPredicted RBP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 INPP5AQ14642 412 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 PLD3Q8IV08 490 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 ATP11CQ8NB49 1132 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 ORAI2Q96SN7 254 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.24■□□□□ 0.51
ITGB4-201ENST00000200181 BRIP1Q9BX63 1249 aa18.24■□□□□ 0.51
ITGB4-201ENST00000200181 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 PGM1P36871 562 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 FASTKD1Q53R41 847 aaKnown RBP18.23■□□□□ 0.51
ITGB4-201ENST00000200181 NFRKBQ6P4R8 1299 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 RINLQ6ZS11 566 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 PHF21AQ96BD5 680 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 SERPINB13Q9UIV8 391 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 ZNF699Q32M78 642 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 FAM187AA6NFU0 413 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 NCK2O43639 380 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 GJC2Q5T442 439 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-201ENST00000200181 DEPDC1Q5TB30 811 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 RNF135Q8IUD6 432 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 WWP1Q9H0M0 922 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-201ENST00000200181 TTC23LQ6PF05 361 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 ARHGAP27Q6ZUM4 889 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 C11orf70Q9BRQ4 267 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-201ENST00000200181 AFF4Q9UHB7 1163 aaKnown RBP18.23■□□□□ 0.51
ITGB4-201ENST00000200181 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
ITGB4-201ENST00000200181 ZNF263O14978 683 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 CNGA3Q16281 694 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ELMSAN1Q6PJG2 1045 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 TMEM270Q6UE05 265 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ENAHQ8N8S7 591 aaPredicted RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 IP6K2Q9UHH9 426 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 TSR3Q9UJK0 312 aaKnown RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ITPRIPL1Q6GPH6 555 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 CDKL3Q8IVW4 592 aaPredicted RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 SLITRK6Q9H5Y7 841 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 PCDHGB4Q9UN71 923 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ESYT3A0FGR9 886 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 S100A5P33763 92 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 MAFGO15525 162 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 NR3C1P04150 777 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ARHGEF6Q15052 776 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 PROM2Q8N271 834 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 SH3GLB2Q9NR46 395 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 INSRP06213 1382 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 TNFAIP2Q03169 654 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 SLC27A3Q5K4L6 730 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 RABGAP1LQ5R372 815 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 FAM160B2Q86V87 743 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 IL17REQ8NFR9 667 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ACAP3Q96P50 834 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 GPBP1L1Q9HC44 474 aaPredicted RBP18.22■□□□□ 0.51
ITGB4-201ENST00000200181 KIAA1586Q9HCI6 787 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 PRKAG2Q9UGJ0 569 aa18.22■□□□□ 0.51
ITGB4-201ENST00000200181 PRPF4O43172 522 aaKnown RBP eCLIP18.21■□□□□ 0.51
ITGB4-201ENST00000200181 TYK2P29597 1187 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 SDC4P31431 198 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 SERPINB4P48594 390 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 JAK3P52333 1124 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 SLC10A5Q5PT55 438 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 CATSPER4Q7RTX7 472 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 SH3KBP1Q96B97 665 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 DDX47Q9H0S4 455 aaKnown RBP18.21■□□□□ 0.51
ITGB4-201ENST00000200181 ATP6V0A4Q9HBG4 840 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 NDFIP2Q9NV92 336 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 DDX56Q9NY93 547 aaKnown RBP18.21■□□□□ 0.51
ITGB4-201ENST00000200181 ZSWIM5Q9P217 1185 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 TRIM49BA6NDI0 452 aa18.21■□□□□ 0.51
ITGB4-201ENST00000200181 EIF2AK2P19525 551 aaKnown RBP18.21■□□□□ 0.51
ITGB4-201ENST00000200181 HSPA9P38646 679 aaKnown RBP18.21■□□□□ 0.51
ITGB4-201ENST00000200181 PRAMEP78395 509 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms