RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Scgb2b18A0A087WPA9 112 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Osbpl9A2A8Z1 736 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 JrklB2RRL2 523 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Aco1P28271 889 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Crnkl1P63154 690 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 PhexP70669 749 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tmem109Q3UBX0 243 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Aak1Q3UHJ0 959 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Kif11Q6P9P6 1052 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Polr2bQ8CFI7 1174 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ints5Q8CHT3 1018 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ccdc137Q8R0K4 290 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Eif3hQ91WK2 352 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Apobec3Q99J72 440 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Wdr46Q9Z0H1 622 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mzf1S4R1L6 814 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Zfp839E9PUU5 921 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ppef2O35385 757 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Spata5Q3UMC0 893 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Lamc2Q61092 1191 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 PapolaQ61183 739 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Slc20a2Q80UP8 656 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Alx1Q8C8B0 326 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cdc42ep4Q9JM96 349 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Slc8a3S4R2P9 928 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Zfp558E9Q1J0 407 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mphosph8Q3TYA6 858 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 MtrrQ8C1A3 696 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Phc3Q8CHP6 981 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Kiaa0319lQ8K135 1048 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Grtp1Q9D3N8 359 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Nek3Q9R0A5 511 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Adam22Q9R1V6 904 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Syngap1F6SEU4 1340 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Chrna5Q2MKA5 467 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Syne3Q4FZC9 975 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fam49aQ8BHZ0 323 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Sp8Q8BMJ8 486 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ciapin1Q8WTY4 309 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 FtcdQ91XD4 541 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tubgcp6G5E8P0 1769 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Rsrc2A2RTL5 376 aaKnown RBP12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Etnk2A7MCT6 385 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mfsd4b4J3QNS5 503 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 CstaP56567 97 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Sema3eP70275 775 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Wnk4Q80UE6 1222 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ms4a5Q810P8 197 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cwf19l1Q8CI33 537 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Parp10Q8CIE4 960 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fgd4Q91ZT5 766 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gpihbp1Q9D1N2 228 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Rabl3Q9D4V7 236 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Adgrb3Q80ZF8 1522 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyp4f17G3UW78 524 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm3182K7N6T8 263 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Hsd17b1P51656 344 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tmem165P52875 323 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Wdr41Q3UDP0 460 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Lrch2Q3UMG5 773 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Znf652Q5DU09 608 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Hif1aQ61221 836 aaKnown RBP12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fndc3aQ8BX90 1198 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyp4f16Q99N17 524 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tube1Q9D6T1 475 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Plod1Q9R0E2 728 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Prdm2A2A7B5 1709 aaKnown RBP12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ercc6l2Q9JIM3 1537 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm4307E9PZY4 289 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm4312K9J7E2 289 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Hace1Q3U0D9 909 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Vmn1r209Q5NC97 312 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 EregQ61521 162 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Zbtb41Q811F1 908 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Enoph1Q8BGB7 257 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Actl9Q8CG27 415 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 MyripQ8K3I4 856 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Nrbp2Q91V36 499 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Josd2Q9CR30 188 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tsc1Q9EP53 1161 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Pard6bQ9JK83 371 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Eif2ak1Q9Z2R9 619 aa12.44□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Dync1i2O88487 612 aaKnown RBP12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fcer2P20693 331 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Scp2P32020 547 aaKnown RBP12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Asap3Q5U464 904 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 ChukQ60680 745 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Churc1Q6DG52 112 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tph2Q8CGV2 488 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Yipf1Q91VU1 306 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tlr8P58682 1032 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Prr7Q3V0I2 269 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fsd1lQ8BYN5 507 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Bbs7Q8K2G4 715 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 CbsQ91WT9 561 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fgfr1op2Q9CRA9 253 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm20721E9Q2U8 318 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Akr1b10G5E895 316 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Nfatc2ipO09130 412 aa12.43□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fam167bP17257 162 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms