RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Krt23Q99PS0 422 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Zfp623Q9CY99 499 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Dmrtc1Q9D9R7 182 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Cdc42ep4Q9JM96 349 aaKnown RBP13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Pex3Q9QXY9 372 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Peg12Q9WVA7 283 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Cep295Q8BQ48 2412 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Pramel3A2AHA7 463 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm7903A2AWL1 463 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ace3D0G895 737 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Vmn2r71L7N2D8 855 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Bcl7cO08664 217 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 EnamO55196 1274 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 EgfP01132 1217 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Pgk1P09411 417 aaKnown RBP13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ca3P16015 260 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Cxcl12P40224 93 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Stat5aP42230 793 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Rfx1P48377 963 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Sox1P53783 391 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Zdhhc9P59268 364 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Kiaa1468Q148V7 1216 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Sppl2bQ3TD49 578 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Exoc3Q6KAR6 755 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gpbp1Q6NXH3 473 aaKnown RBP13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 PogkQ80TC5 607 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 HomezQ80W88 542 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Tspan18Q80WR1 248 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ehd2Q8BH64 543 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Haus7Q8BKT8 364 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Srek1Q8BZX4 494 aaKnown RBP13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Kctd12bQ8C7J6 292 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ablim1Q8K4G5 861 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Smg8Q8VE18 991 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Cabp7Q91ZM8 215 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Atp6v0a4Q920R6 833 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Kremen1Q99N43 473 aa13.43□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Rev3lQ61493 3122 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Clca3bE9PUL3 1044 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Krt78E9Q0F0 1068 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Nolc1E9Q5C9 702 aaKnown RBP13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm11239E9Q5Z9 360 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm11237F2Z3W5 360 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm11238F2Z478 360 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Akr1c19G3X9Y6 323 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Smpd2O70572 419 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Idh1O88844 414 aaKnown RBP13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ercc5P35689 1170 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm428Q3UTE2 360 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Wdr18Q4VBE8 431 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Mcm7Q61881 719 aaKnown RBP13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 PtprjQ64455 1238 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Usp49Q6P9L4 685 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 PoliQ6R3M4 717 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 IqcgQ80W32 419 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Csrnp2Q8BGQ2 534 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Tmem220Q8BP07 167 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Pwp2Q8BU03 919 aaKnown RBP13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ugt2b1Q8R084 529 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Camkk1Q8VBY2 505 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 MiosQ8VE19 875 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Plagl2Q925T4 496 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 CenpsQ9D084 142 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Scyl1Q9EQC5 806 aaKnown RBP13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Grb14Q9JLM9 538 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Scn5aQ9JJV9 2019 aa13.42□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Myo16Q5DU14 1919 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm45194A0A140LJG2 572 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Serpina16D3Z660 418 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm21969J3QJZ1 289 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Dcpp3L7N259 170 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 P01648 108 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 ProcP33587 460 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gbp1Q01514 589 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Fgfr4Q03142 799 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gtf2f1Q3THK3 508 aaKnown RBP13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Zbtb8osQ505B7 168 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Prl2c1Q5SVL9 228 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Klra7Q60654 280 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 ItgaeQ60677 1167 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Usp17laQ61068 526 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Nrg1Q6DR99 700 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Reps2Q80XA6 521 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Slc38a9Q8BGD6 560 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Qsox1Q8BND5 748 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Serpina3bQ8BYY9 420 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Kiaa0391Q8JZY4 584 aaKnown RBP13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Csde1Q91W50 798 aaKnown RBP13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Smyd3Q9CWR2 428 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Spatc1lQ9D9W0 342 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Htatip2Q9Z2G9 242 aa13.41□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Tp53bp1P70399 1969 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm45713A0A1B0GS68 446 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Trappc11B2RXC1 1133 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm6583E9Q8Z1 469 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Taf4bG5E8Z2 855 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Vmn2r78K7N6U5 853 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Hoxd8P23463 289 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Sox9Q04887 507 aa13.4□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Tgfbrap1Q3UR70 860 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms