RNA–Protein interactions for RNA: ENSMUST00000055949.3

Pcdhb18-201, Transcript of Protocadherin beta-18, mousemouse

APPRIS P1 BASIC

Gene Pcdhb18, Length 5,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18-201ENSMUST00000055949 Trim56Q80VI1 734 aaKnown RBP13.65□□□□□ -0.22
Pcdhb18-201ENSMUST00000055949 Efcab14Q8BGQ6 484 aa13.65□□□□□ -0.22
Pcdhb18-201ENSMUST00000055949 Wdr60Q8C761 999 aa13.65□□□□□ -0.22
Pcdhb18-201ENSMUST00000055949 Twf1Q91YR1 350 aaKnown RBP13.65□□□□□ -0.22
Pcdhb18-201ENSMUST00000055949 Sytl1Q99N80 567 aa13.65□□□□□ -0.22
Pcdhb18-201ENSMUST00000055949 Shcbp1Q9Z179 668 aa13.65□□□□□ -0.22
Pcdhb18-201ENSMUST00000055949 Krt16Q9Z2K1 469 aa13.65□□□□□ -0.22
Pcdhb18-201ENSMUST00000055949 Gm9992B2RWK3 458 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Cyp3a59D3Z2W7 503 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 P01734 135 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ass1P16460 412 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Guca1aP43081 202 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Exosc10P56960 887 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Kcnb1Q03717 857 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Islr2Q5RKR3 745 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Pabpc4Q6PHQ9 660 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Unc93aQ710D3 458 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ush1gQ80T11 461 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ano4Q8C5H1 955 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Dnajc17Q91WT4 303 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 ParvaQ9EPC1 372 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Gm21962L7N280 338 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Spag7Q7TNE3 227 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Lrfn2Q80TG9 788 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Tigd4Q8BUZ3 513 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Trappc12Q8K2L8 797 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Il31raQ8K5B1 716 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Fam133bQ9CVI2 245 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 AV320801A2AWL3 467 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Brpf3B2KF05 1204 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Gm3371F7CQW8 167 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Gm15023L7MUB4 467 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Odc1P00860 461 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Sox5P35710 763 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Slc12a1P55014 1095 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Foxred2Q3USW5 665 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 NntQ61941 1086 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Unc45bQ8CGY6 931 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ints4Q8CIM8 964 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Elp3Q9CZX0 547 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Eya4Q9Z191 616 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Unc13aQ4KUS2 1712 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Pdzd8B9EJ80 1147 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Spata31E9QAF0 1014 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Zfp408H7BX78 710 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 PtpreP49446 699 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Usp28Q5I043 1051 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ppp1r37Q8BKR5 712 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Mei4Q8BRM6 389 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 BfarQ8R079 450 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 FktnQ8R507 461 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Trex1Q91XB0 314 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Sf3b3Q921M3 1217 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 NptxrQ99J85 493 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Adamts12Q811B3 1600 aa13.64□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Zfyve16Q80U44 1528 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 DgkkE9Q7N4 1118 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 PrkcbP68404 671 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Cd180Q62192 661 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Rhot1Q8BG51 631 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ophn1Q99J31 802 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Gstt4Q9D4P7 240 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Spata1Q9D5R4 444 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Hyou1Q9JKR6 999 aaKnown RBP13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Cdc42bpgQ80UW5 1551 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Lrrc38A2VDH3 298 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Vmn2r71L7N2D8 855 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Hoxb8P09632 243 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Pde6bP23440 856 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Fkbp1aP26883 108 aaKnown RBP13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Cd22P35329 862 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Cops2P61202 443 aaKnown RBP13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 SnrpfP62307 86 aaKnown RBP13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 DnerQ8JZM4 737 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ppp6r2Q8R3Q2 923 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Mccc1Q99MR8 717 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Add3Q9QYB5 706 aaKnown RBP13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 PtpruB1AUH1 1446 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 PtprcP06800 1291 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Eps15l1Q60902 907 aaKnown RBP13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Fbxo41Q6NS60 873 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Fnbp1Q80TY0 616 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 B3galnt2Q8BG28 504 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Kif14L0N7N1 1674 aaKnown RBP13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Gm3264L7N2C5 238 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 VdrP48281 422 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Slc30a9Q5IRJ6 567 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Tcf12Q61286 706 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Clec16aQ80U30 1036 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Mrpl47Q8K2Y7 252 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ttc8Q8VD72 515 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Olfr395Q8VGR3 312 aa13.63□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Akr1b1P45376 316 aa13.62□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Trappc3lQ4KL14 181 aa13.62□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Hsph1Q61699 858 aaKnown RBP13.62□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Them6Q80ZW2 207 aa13.62□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 AarsQ8BGQ7 968 aa13.62□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Ifi205aQ8CGE8 404 aa13.62□□□□□ -0.23
Pcdhb18-201ENSMUST00000055949 Eva1bQ8K2Y3 164 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms