RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Mx2Q9WVP9 655 aa23.03■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Igkv18-36A0A075B5M9 114 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Sycp2lA0A0M3U1B0 842 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Kansl3A2RSY1 903 aaKnown RBP23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 ImpactO55091 318 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Ifnar1P33896 590 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Capn13Q3UW68 665 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Grxcr1Q50H32 290 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Zmym6Q8BS54 1249 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Ccdc122Q8BVN0 290 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Znf467Q8JZL0 594 aa23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Atp13a1Q9EPE9 1200 aaKnown RBP23.02■■□□□ 1.28
Ssbp4-201ENSMUST00000049908 Szt2A2A9C3 3431 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Gm4924A0A1B0GR71 966 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Man1b1A2AJ15 658 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Tal1P22091 329 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Wnt8aQ64527 354 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Ppp2r5aQ6PD03 486 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Smarca1Q6PGB8 1046 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 PoliQ6R3M4 717 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Cep128Q8BI22 1102 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Znf689Q8BKK5 500 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Unc93b1Q8VCW4 598 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Sh3bgrQ9WUZ7 214 aa23.01■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Herc3A6H6S0 1050 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Ccdc152E9PX14 254 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Gbp1Q01514 589 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Kiaa1841Q68FF0 718 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Colgalt2Q6NVG7 625 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Mbtd1Q6P5G3 631 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Fhod1Q6P9Q4 1197 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Hook1Q8BIL5 728 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Trim9Q8C7M3 817 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Tnpo2Q99LG2 887 aaKnown RBP23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Slc12a9Q99MR3 914 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Brms1Q99N20 246 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Oaz3Q9R109 243 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Plxna1P70206 1894 aa23■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Taf1Q80UV9 1891 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Trappc11B2RXC1 1133 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Zfp882E9Q4R4 555 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Resp18P47939 175 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Rrp1P56183 494 aaKnown RBP22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 DsppP97399 934 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Nsun7Q14AW5 724 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Aggf1Q7TN31 711 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 FtoQ8BGW1 502 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Tmem220Q8BP07 167 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Pcdhb15Q91Y04 786 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 B3galt6Q91Z92 325 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Pus10Q9D3U0 527 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Dusp10Q9ESS0 483 aa22.99■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Vmn2r17E9PYF5 849 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Pcmtd1P59913 357 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Sppl2bQ3TD49 578 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Cyth4Q80YW0 393 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Ildr1Q8CBR1 537 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Olfr390Q8VEZ7 311 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Adam33Q923W9 797 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Pcdh11xF6ZNL5 1338 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Baz2aQ91YE5 1889 aaKnown RBP22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 AurkbO70126 345 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Zbtb8osQ505B7 168 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Klra7Q60654 280 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Vps72Q62481 368 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Caps2Q8BUG5 550 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Pde5aQ8CG03 865 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Cacnb1Q8R3Z5 597 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Micu3Q9CTY5 523 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Smyd3Q9CWR2 428 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Ddah1Q9CWS0 285 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Spock2Q9ER58 423 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 B4galt4Q9JJ04 344 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Large1Q9Z1M7 756 aa22.98■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 CluhQ5SW19 1315 aa22.97■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Kng1O08677 661 aa22.97■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Cyp17a1P27786 507 aa22.97■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Tgfbrap1Q3UR70 860 aa22.97■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Igdcc3Q8BQC3 813 aa22.97■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 BccipQ9CWI3 316 aa22.97■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 PdcQ9QW08 244 aa22.97■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Fam209A2APA5 170 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Dcpp3L7N259 170 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 DeptorQ570Y9 409 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Cacna2d4Q5RJF7 1116 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Tcf12Q61286 706 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Asic1Q6NXK8 526 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Ehd2Q8BH64 543 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 TraipQ8VIG6 470 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 TnmdQ9EP64 317 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Fbxo17Q9QZM8 286 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Vnn1Q9Z0K8 512 aa22.96■■□□□ 1.27
Ssbp4-201ENSMUST00000049908 Gm4907B1AXB9 411 aa22.95■■□□□ 1.26
Ssbp4-201ENSMUST00000049908 1700018F24RikB2RW27 314 aa22.95■■□□□ 1.26
Ssbp4-201ENSMUST00000049908 Mctp1E9PV86 951 aa22.95■■□□□ 1.26
Ssbp4-201ENSMUST00000049908 Gm6583E9Q8Z1 469 aa22.95■■□□□ 1.26
Ssbp4-201ENSMUST00000049908 Vmn2r78K7N6U5 853 aa22.95■■□□□ 1.26
Ssbp4-201ENSMUST00000049908 Efna5O08543 228 aa22.95■■□□□ 1.26
Ssbp4-201ENSMUST00000049908 Smpd2O70572 419 aa22.95■■□□□ 1.26
Ssbp4-201ENSMUST00000049908 Nol4P60954 483 aa22.95■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms