RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Trpc5Q9QX29 975 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lmtk3Q5XJV6 1424 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Vmn2r78K7N6U5 853 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Stam2O88811 523 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Cyp11b2P15539 500 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Cul4aQ3TCH7 759 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Sec31aQ3UPL0 1230 aaKnown RBP11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Vav2Q60992 868 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Zcchc18Q8VD24 393 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 CluhQ5SW19 1315 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lrrc32G3XA59 663 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Casq2O09161 415 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Orc4O88708 433 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Map3k10Q66L42 940 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Slitrk3Q810B9 980 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Daam1Q8BPM0 1077 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lrrc41Q8K1C9 807 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Cdc27A2A6Q5 825 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Top3aO70157 1003 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gnrh1P13562 90 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Pou5f1P20263 352 aaKnown RBP11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Pth1rP41593 591 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Faf1P54731 649 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Hnrnph2P70333 449 aaKnown RBP11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Prr18Q6PAN7 307 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Sept10Q8C650 452 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Trim9Q8C7M3 817 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Zbtb1Q91VL9 713 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Nek8Q91ZR4 698 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 FignQ9ERZ6 759 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Itsn1Q9Z0R4 1714 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lrriq4A6H6A4 596 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 LmnaP48678 665 aaKnown RBP11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 GssP51855 474 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Pcif1P59114 706 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 EgfrQ01279 1210 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Tbc1d1Q60949 1255 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Phf21aQ6ZPK0 659 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Rpap2Q8VC34 614 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Slc12a8Q8VI23 705 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Trmt44Q9D2Q2 713 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Tmod3Q9JHJ0 352 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Tmed2Q9R0Q3 201 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Maml3D4QGC2 1135 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Zfp850J3QPC5 689 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gm3402K7N5P2 326 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lsp1P19973 330 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 GckP52792 465 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lrch1P62046 709 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Sema3eP70275 775 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Epas1P97481 874 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gbp10Q000W5 611 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Frmd8Q3UFK8 466 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 FntaQ61239 377 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Mysm1Q69Z66 819 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Fsd1lQ8BYN5 507 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Vps39Q8R5L3 886 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Rbm6S4R1W5 1118 aaKnown RBP11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Adgrf5G5E8Q8 1348 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Prr5lA2AVJ5 370 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Apba1B2RUJ5 842 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Adcy7P51829 1099 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gga2Q6P5E6 603 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Sap130Q8BIH0 1057 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Fgfr1op2Q9CRA9 253 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Nde1Q9CZA6 344 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ubxn11Q9D572 484 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 Adgrb1Q3UHD1 1582 aa11.5□□□□□ -0.57
Ciita-201ENSMUST00000023147 ErmardE9Q048 622 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gm10639E9Q6L7 222 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Slc39a2G3X943 309 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gsta2P10648 222 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Fam167bP17257 162 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Atp1b3P97370 278 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Dpp9Q8BVG4 862 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Plagl2Q925T4 496 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Scrn1Q9CZC8 414 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Slc2a5Q9WV38 501 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 PapolbQ9WVP6 641 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Adck2Q6NSR3 617 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Usp49Q6P9L4 685 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Med21Q9CQ39 144 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Pramef12Q9D2F1 463 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 LrmdaQ9D9B4 229 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ccdc103Q9D9P2 237 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ric1Q69ZJ7 1422 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gm6370A0A0G2JGX9 315 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Frmd7A2AD83 703 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ccdc62E9PVD1 701 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gm6309L7N481 315 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Cyfip2Q5SQX6 1253 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 FcgrtQ61559 365 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Dcaf15Q6PFH3 600 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Rnf31Q924T7 1066 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Trmt112Q9DCG9 125 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Twf2Q9Z0P5 349 aaKnown RBP11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 NyxP83503 476 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lrig2Q52KR2 1054 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 ChukQ60680 745 aa11.49□□□□□ -0.57
Ciita-201ENSMUST00000023147 Eno4Q8C042 619 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms