RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C SAG1P20840 650 aa1.92□□□□□ -2.1
RPB11YOL005C MIR1P23641 311 aaKnown RBP1.92□□□□□ -2.1
RPB11YOL005C RDS1P25611 832 aa1.92□□□□□ -2.1
RPB11YOL005C POT1P27796 417 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
RPB11YOL005C PMT2P31382 759 aa1.92□□□□□ -2.1
RPB11YOL005C VAM7P32912 316 aa1.92□□□□□ -2.1
RPB11YOL005C YKR015CP36111 568 aa1.92□□□□□ -2.1
RPB11YOL005C SIF2P38262 535 aa1.92□□□□□ -2.1
RPB11YOL005C ATG7P38862 630 aa1.92□□□□□ -2.1
RPB11YOL005C ALD5P40047 520 aaKnown RBP1.92□□□□□ -2.1
RPB11YOL005C LCP5P40079 357 aaPredicted RBP1.92□□□□□ -2.1
RPB11YOL005C YNL320WP42840 284 aa1.92□□□□□ -2.1
RPB11YOL005C YFL012WP43580 148 aa1.92□□□□□ -2.1
RPB11YOL005C AIM23P47015 356 aa1.92□□□□□ -2.1
RPB11YOL005C FLC3P53121 802 aa1.92□□□□□ -2.1
RPB11YOL005C MRX11Q03079 207 aa1.92□□□□□ -2.1
RPB11YOL005C NAT4Q04751 285 aa1.92□□□□□ -2.1
RPB11YOL005C PML1Q07930 204 aaPredicted RBP1.92□□□□□ -2.1
RPB11YOL005C LDB17Q12342 491 aa1.92□□□□□ -2.1
RPB11YOL005C AIM45Q12480 344 aaKnown RBP1.92□□□□□ -2.1
RPB11YOL005C YDL012CQ12489 107 aa1.92□□□□□ -2.1
RPB11YOL005C SFG1Q12507 346 aa1.92□□□□□ -2.1
RPB11YOL005C RPS16AP0CX51 143 aaKnown RBP1.91□□□□□ -2.1
RPB11YOL005C RPS16BP0CX52 143 aaKnown RBP1.91□□□□□ -2.1
RPB11YOL005C PUT4P15380 627 aa1.91□□□□□ -2.1
RPB11YOL005C ARF2P19146 181 aaKnown RBP1.91□□□□□ -2.1
RPB11YOL005C EPT1P22140 391 aa1.91□□□□□ -2.1
RPB11YOL005C HXT2P23585 541 aa1.91□□□□□ -2.1
RPB11YOL005C MXR2P25566 168 aa1.91□□□□□ -2.1
RPB11YOL005C ZUO1P32527 433 aaKnown RBP1.91□□□□□ -2.1
RPB11YOL005C TOA1P32773 286 aa1.91□□□□□ -2.1
RPB11YOL005C MRPS5P33759 307 aa1.91□□□□□ -2.1
RPB11YOL005C IML3P38265 245 aa1.91□□□□□ -2.1
RPB11YOL005C ECM34P38728 170 aa1.91□□□□□ -2.1
RPB11YOL005C ALP1P38971 573 aa1.91□□□□□ -2.1
RPB11YOL005C YHC3P47040 408 aa1.91□□□□□ -2.1
RPB11YOL005C SEH1P53011 349 aaKnown RBP1.91□□□□□ -2.1
RPB11YOL005C NBL1Q3E7Y6 73 aa1.91□□□□□ -2.1
RPB11YOL005C KRE5P22023 1365 aa1.9□□□□□ -2.11
RPB11YOL005C TAL1P15019 335 aaKnown RBP1.9□□□□□ -2.11
RPB11YOL005C FAR1P21268 830 aa1.9□□□□□ -2.11
RPB11YOL005C GRR1P24814 1151 aa1.9□□□□□ -2.11
RPB11YOL005C CIN8P27895 1000 aa1.9□□□□□ -2.11
RPB11YOL005C ECT1P33412 323 aa1.9□□□□□ -2.11
RPB11YOL005C MOB2P43563 287 aa1.9□□□□□ -2.11
RPB11YOL005C HIT1P46973 164 aa1.9□□□□□ -2.11
RPB11YOL005C YJR054WP47114 497 aa1.9□□□□□ -2.11
RPB11YOL005C YGR015CP53208 328 aa1.9□□□□□ -2.11
RPB11YOL005C VHT1P53241 593 aa1.9□□□□□ -2.11
RPB11YOL005C HST1P53685 503 aa1.9□□□□□ -2.11
RPB11YOL005C YNL146WP53906 100 aa1.9□□□□□ -2.11
RPB11YOL005C RMI1Q02685 241 aa1.9□□□□□ -2.11
RPB11YOL005C RNY1Q02933 434 aaKnown RBP1.9□□□□□ -2.11
RPB11YOL005C TRM82Q03774 444 aa1.9□□□□□ -2.11
RPB11YOL005C FRE8Q12209 686 aa1.9□□□□□ -2.11
RPB11YOL005C SPO24Q3E752 67 aa1.9□□□□□ -2.11
RPB11YOL005C YBL111CQ3E7Y5 667 aa1.9□□□□□ -2.11
RPB11YOL005C PDR5P33302 1511 aaKnown RBP1.9□□□□□ -2.11
RPB11YOL005C TY3B-GQ99315 1547 aa1.9□□□□□ -2.11
RPB11YOL005C CAT8P39113 1433 aa1.9□□□□□ -2.11
RPB11YOL005C DNF3Q12674 1656 aa1.9□□□□□ -2.11
RPB11YOL005C FLO11P08640 1367 aa1.89□□□□□ -2.11
RPB11YOL005C RPS19AP07280 144 aaKnown RBP1.89□□□□□ -2.11
RPB11YOL005C RPS19BP07281 144 aaPredicted RBP1.89□□□□□ -2.11
RPB11YOL005C OPI1P21957 404 aa1.89□□□□□ -2.11
RPB11YOL005C URA10P30402 227 aa1.89□□□□□ -2.11
RPB11YOL005C MKK1P32490 508 aa1.89□□□□□ -2.11
RPB11YOL005C SPS19P32573 292 aaKnown RBP1.89□□□□□ -2.11
RPB11YOL005C MYO3P36006 1272 aa1.89□□□□□ -2.11
RPB11YOL005C YKL071WP36086 256 aa1.89□□□□□ -2.11
RPB11YOL005C PCH2P38126 564 aa1.89□□□□□ -2.11
RPB11YOL005C IST2P38250 946 aa1.89□□□□□ -2.11
RPB11YOL005C PRP39P39682 629 aaKnown RBP1.89□□□□□ -2.11
RPB11YOL005C ATP22P50273 684 aaPredicted RBP1.89□□□□□ -2.11
RPB11YOL005C NRM1P53718 249 aa1.89□□□□□ -2.11
RPB11YOL005C CSM3Q04659 317 aa1.89□□□□□ -2.11
RPB11YOL005C TIR4Q12218 487 aaPredicted RBP1.89□□□□□ -2.11
RPB11YOL005C HIF1Q12373 385 aa1.89□□□□□ -2.11
RPB11YOL005C RGS2Q99188 309 aa1.89□□□□□ -2.11
RPB11YOL005C USO1P25386 1790 aa1.89□□□□□ -2.11
RPB11YOL005C CHC1P22137 1653 aaKnown RBP1.89□□□□□ -2.11
RPB11YOL005C RAD1P06777 1100 aa1.88□□□□□ -2.11
RPB11YOL005C BGL2P15703 313 aaKnown RBP1.88□□□□□ -2.11
RPB11YOL005C UTR1P21373 530 aa1.88□□□□□ -2.11
RPB11YOL005C SMP1P38128 452 aa1.88□□□□□ -2.11
RPB11YOL005C RRT13P40042 185 aa1.88□□□□□ -2.11
RPB11YOL005C YGL114WP53134 725 aa1.88□□□□□ -2.11
RPB11YOL005C APJ1P53940 528 aa1.88□□□□□ -2.11
RPB11YOL005C YDR286CQ05530 114 aa1.88□□□□□ -2.11
RPB11YOL005C BUR2Q05949 395 aa1.88□□□□□ -2.11
RPB11YOL005C YOL029CQ08187 201 aa1.88□□□□□ -2.11
RPB11YOL005C DDC1Q08949 612 aa1.88□□□□□ -2.11
RPB11YOL005C MMT2Q08970 484 aa1.88□□□□□ -2.11
RPB11YOL005C SLM3Q12093 417 aa1.88□□□□□ -2.11
RPB11YOL005C PSY3Q12318 242 aa1.88□□□□□ -2.11
RPB11YOL005C SRB8P25648 1427 aa1.88□□□□□ -2.11
RPB11YOL005C YBT1P32386 1661 aa1.87□□□□□ -2.11
RPB11YOL005C STE2D6VTK4 431 aa1.87□□□□□ -2.11
RPB11YOL005C SEC7P11075 2009 aaKnown RBP1.87□□□□□ -2.11
RPB11YOL005C TRX1P22217 103 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms