RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C TIM13P53299 105 aa2.72□□□□□ -1.97
ATG3YNR007C MAL13P53338 473 aa2.72□□□□□ -1.97
ATG3YNR007C PRP38Q00723 242 aaPredicted RBP2.72□□□□□ -1.97
ATG3YNR007C SKO1Q02100 647 aa2.72□□□□□ -1.97
ATG3YNR007C VPS60Q03390 229 aa2.72□□□□□ -1.97
ATG3YNR007C VTI1Q04338 217 aa2.72□□□□□ -1.97
ATG3YNR007C YLR177WQ06251 628 aa2.72□□□□□ -1.97
ATG3YNR007C CUE5Q08412 411 aaKnown RBP2.72□□□□□ -1.97
ATG3YNR007C MED2Q12124 431 aa2.72□□□□□ -1.97
ATG3YNR007C RRP42Q12277 265 aaPredicted RBP2.72□□□□□ -1.97
ATG3YNR007C ISA2Q12425 185 aa2.72□□□□□ -1.97
ATG3YNR007C IPP1P00817 287 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C NSP1P14907 823 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C MGT1P26188 188 aa2.71□□□□□ -1.98
ATG3YNR007C ADE1P27616 306 aa2.71□□□□□ -1.98
ATG3YNR007C YIM1P28625 365 aa2.71□□□□□ -1.98
ATG3YNR007C ATS1P31386 333 aa2.71□□□□□ -1.98
ATG3YNR007C COX13P32799 129 aa2.71□□□□□ -1.98
ATG3YNR007C CYM1P32898 989 aa2.71□□□□□ -1.98
ATG3YNR007C VPS21P36017 210 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C THI2P38141 450 aa2.71□□□□□ -1.98
ATG3YNR007C YHR127WP38833 243 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C CCT2P39076 527 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C PRP39P39682 629 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C SEO1P39709 593 aa2.71□□□□□ -1.98
ATG3YNR007C RPR2P40571 144 aa2.71□□□□□ -1.98
ATG3YNR007C CAK1P43568 368 aaPredicted RBP2.71□□□□□ -1.98
ATG3YNR007C YJR149WP47177 404 aa2.71□□□□□ -1.98
ATG3YNR007C BOL2P53082 120 aa2.71□□□□□ -1.98
ATG3YNR007C CLD1P53264 445 aa2.71□□□□□ -1.98
ATG3YNR007C DSL1P53847 754 aa2.71□□□□□ -1.98
ATG3YNR007C KTR5P53966 522 aaPredicted RBP2.71□□□□□ -1.98
ATG3YNR007C VHS1Q03785 461 aa2.71□□□□□ -1.98
ATG3YNR007C HSP31Q04432 237 aa2.71□□□□□ -1.98
ATG3YNR007C ERB1Q04660 807 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C ROY1Q04847 553 aa2.71□□□□□ -1.98
ATG3YNR007C CDC123Q05791 360 aa2.71□□□□□ -1.98
ATG3YNR007C RUD3Q12234 484 aaKnown RBP2.71□□□□□ -1.98
ATG3YNR007C YOL107WQ12239 342 aa2.71□□□□□ -1.98
ATG3YNR007C UBR1P19812 1950 aa2.7□□□□□ -1.98
ATG3YNR007C RAD10P06838 210 aa2.7□□□□□ -1.98
ATG3YNR007C GAL7P08431 366 aa2.7□□□□□ -1.98
ATG3YNR007C YAR066WP0CX18 203 aa2.7□□□□□ -1.98
ATG3YNR007C YHR214WP0CX19 203 aa2.7□□□□□ -1.98
ATG3YNR007C SRV2P17555 526 aaKnown RBP2.7□□□□□ -1.98
ATG3YNR007C PET123P17558 318 aa2.7□□□□□ -1.98
ATG3YNR007C URA4P20051 364 aa2.7□□□□□ -1.98
ATG3YNR007C CPR2P23285 205 aa2.7□□□□□ -1.98
ATG3YNR007C PRP21P32524 280 aaPredicted RBP2.7□□□□□ -1.98
ATG3YNR007C VMA8P32610 256 aaKnown RBP2.7□□□□□ -1.98
ATG3YNR007C CAB3P36076 571 aa2.7□□□□□ -1.98
ATG3YNR007C TIM17P39515 158 aa2.7□□□□□ -1.98
ATG3YNR007C SHO1P40073 367 aa2.7□□□□□ -1.98
ATG3YNR007C UTP18P40362 594 aaPredicted RBP2.7□□□□□ -1.98
ATG3YNR007C GWT1P47026 490 aa2.7□□□□□ -1.98
ATG3YNR007C YJR030CP47101 745 aa2.7□□□□□ -1.98
ATG3YNR007C SDT1P53078 280 aa2.7□□□□□ -1.98
ATG3YNR007C SHY1P53266 389 aa2.7□□□□□ -1.98
ATG3YNR007C RCF2P53721 224 aa2.7□□□□□ -1.98
ATG3YNR007C FRE4P53746 719 aa2.7□□□□□ -1.98
ATG3YNR007C SLT2Q00772 484 aa2.7□□□□□ -1.98
ATG3YNR007C SED5Q01590 340 aa2.7□□□□□ -1.98
ATG3YNR007C CIK1Q01649 594 aa2.7□□□□□ -1.98
ATG3YNR007C HOT1Q03213 719 aa2.7□□□□□ -1.98
ATG3YNR007C YET2Q04210 160 aa2.7□□□□□ -1.98
ATG3YNR007C RKM1Q08961 583 aaPredicted RBP2.7□□□□□ -1.98
ATG3YNR007C YOR114WQ12219 294 aa2.7□□□□□ -1.98
ATG3YNR007C VAM3Q12241 283 aa2.7□□□□□ -1.98
ATG3YNR007C RRP36Q12481 300 aaPredicted RBP2.7□□□□□ -1.98
ATG3YNR007C SRN2Q99176 213 aa2.7□□□□□ -1.98
ATG3YNR007C ISN1Q99312 450 aa2.7□□□□□ -1.98
ATG3YNR007C RAD1P06777 1100 aa2.69□□□□□ -1.98
ATG3YNR007C STE3P06783 470 aa2.69□□□□□ -1.98
ATG3YNR007C CMD1P06787 147 aaKnown RBP2.69□□□□□ -1.98
ATG3YNR007C RPL20AP0CX23 172 aaKnown RBP2.69□□□□□ -1.98
ATG3YNR007C RPL20BP0CX24 172 aaPredicted RBP2.69□□□□□ -1.98
ATG3YNR007C GCD2P12754 651 aaPredicted RBP2.69□□□□□ -1.98
ATG3YNR007C NMT1P14743 455 aa2.69□□□□□ -1.98
ATG3YNR007C YCR099CP25657 155 aa2.69□□□□□ -1.98
ATG3YNR007C SIN4P32259 974 aa2.69□□□□□ -1.98
ATG3YNR007C NIP1P32497 812 aaKnown RBP2.69□□□□□ -1.98
ATG3YNR007C GCG1P32656 232 aaKnown RBP2.69□□□□□ -1.98
ATG3YNR007C ASC1P38011 319 aaKnown RBP2.69□□□□□ -1.98
ATG3YNR007C PCH2P38126 564 aa2.69□□□□□ -1.98
ATG3YNR007C SPP381P38282 291 aaPredicted RBP2.69□□□□□ -1.98
ATG3YNR007C EFM1P38732 585 aa2.69□□□□□ -1.98
ATG3YNR007C SEC9P40357 651 aa2.69□□□□□ -1.98
ATG3YNR007C YIL067CP40514 678 aa2.69□□□□□ -1.98
ATG3YNR007C IDP2P41939 412 aa2.69□□□□□ -1.98
ATG3YNR007C YJR011CP47086 261 aaPredicted RBP2.69□□□□□ -1.98
ATG3YNR007C ECM27P47144 725 aa2.69□□□□□ -1.98
ATG3YNR007C IBA57P47158 497 aa2.69□□□□□ -1.98
ATG3YNR007C SSN8P47821 323 aa2.69□□□□□ -1.98
ATG3YNR007C TRM9P49957 279 aa2.69□□□□□ -1.98
ATG3YNR007C EFM5P53200 248 aaKnown RBP2.69□□□□□ -1.98
ATG3YNR007C YGR015CP53208 328 aa2.69□□□□□ -1.98
ATG3YNR007C GOR1P53839 350 aa2.69□□□□□ -1.98
ATG3YNR007C PEX25Q02969 394 aa2.69□□□□□ -1.98
ATG3YNR007C ATG38Q05789 226 aaKnown RBP2.69□□□□□ -1.98
ATG3YNR007C GET4Q12125 312 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms