RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C TAF14P35189 244 aa7.98□□□□□ -1.13
RPD3YNL330C THI2P38141 450 aa7.98□□□□□ -1.13
RPD3YNL330C LEU5P38702 357 aa7.98□□□□□ -1.13
RPD3YNL330C SDP1P40479 209 aa7.98□□□□□ -1.13
RPD3YNL330C ICE2P40499 491 aa7.98□□□□□ -1.13
RPD3YNL330C PKP1P40530 394 aa7.98□□□□□ -1.13
RPD3YNL330C FAA4P47912 694 aaKnown RBP7.98□□□□□ -1.13
RPD3YNL330C TOS2P50078 622 aa7.98□□□□□ -1.13
RPD3YNL330C NPY1P53164 384 aa7.98□□□□□ -1.13
RPD3YNL330C SEC13Q04491 297 aaKnown RBP7.98□□□□□ -1.13
RPD3YNL330C FRE3Q08905 711 aa7.98□□□□□ -1.13
RPD3YNL330C FEX1Q08913 375 aa7.98□□□□□ -1.13
RPD3YNL330C YDL211CQ12121 372 aa7.98□□□□□ -1.13
RPD3YNL330C NHP6BP11633 99 aaKnown RBP7.97□□□□□ -1.13
RPD3YNL330C FUR1P18562 216 aaKnown RBP7.97□□□□□ -1.13
RPD3YNL330C RNA14P25298 677 aaKnown RBP7.97□□□□□ -1.13
RPD3YNL330C AGP1P25376 633 aa7.97□□□□□ -1.13
RPD3YNL330C MGR1P25573 417 aa7.97□□□□□ -1.13
RPD3YNL330C PRE4P30657 266 aa7.97□□□□□ -1.13
RPD3YNL330C VPS17P32913 551 aa7.97□□□□□ -1.13
RPD3YNL330C LST4P34239 828 aa7.97□□□□□ -1.13
RPD3YNL330C YOR062CP36025 268 aa7.97□□□□□ -1.13
RPD3YNL330C HTD2P38790 280 aaKnown RBP7.97□□□□□ -1.13
RPD3YNL330C RRP4P38792 359 aaKnown RBP7.97□□□□□ -1.13
RPD3YNL330C TED1P40533 473 aa7.97□□□□□ -1.13
RPD3YNL330C AIM25P47140 327 aa7.97□□□□□ -1.13
RPD3YNL330C RSM28Q03430 361 aa7.97□□□□□ -1.13
RPD3YNL330C YLR224WQ05947 369 aa7.97□□□□□ -1.13
RPD3YNL330C SSK1Q07084 712 aa7.97□□□□□ -1.13
RPD3YNL330C CDC9P04819 755 aa7.96□□□□□ -1.14
RPD3YNL330C DSF1P0CX08 502 aa7.96□□□□□ -1.14
RPD3YNL330C YNR073CP0CX09 502 aa7.96□□□□□ -1.14
RPD3YNL330C MTH1P35198 433 aa7.96□□□□□ -1.14
RPD3YNL330C APL3P38065 1025 aa7.96□□□□□ -1.14
RPD3YNL330C PRE3P38624 215 aa7.96□□□□□ -1.14
RPD3YNL330C RRP3P38712 501 aaKnown RBP7.96□□□□□ -1.14
RPD3YNL330C RFC4P40339 323 aaKnown RBP7.96□□□□□ -1.14
RPD3YNL330C SWM2P40342 146 aa7.96□□□□□ -1.14
RPD3YNL330C RPL10P41805 221 aaKnown RBP7.96□□□□□ -1.14
RPD3YNL330C PAM16P42949 149 aa7.96□□□□□ -1.14
RPD3YNL330C BNA6P43619 295 aa7.96□□□□□ -1.14
RPD3YNL330C PPT1P53043 513 aa7.96□□□□□ -1.14
RPD3YNL330C DOC1P53068 250 aa7.96□□□□□ -1.14
RPD3YNL330C GPG1P53130 126 aa7.96□□□□□ -1.14
RPD3YNL330C ART5P53244 586 aaKnown RBP7.96□□□□□ -1.14
RPD3YNL330C SNO2P53823 222 aa7.96□□□□□ -1.14
RPD3YNL330C HXT11P54862 567 aa7.96□□□□□ -1.14
RPD3YNL330C YDR541CQ03049 344 aa7.96□□□□□ -1.14
RPD3YNL330C PRM15Q03262 622 aa7.96□□□□□ -1.14
RPD3YNL330C YEH1Q07804 573 aa7.96□□□□□ -1.14
RPD3YNL330C DET1Q99288 334 aaKnown RBP7.96□□□□□ -1.14
RPD3YNL330C COX9P07255 59 aa7.95□□□□□ -1.14
RPD3YNL330C MRP1P10662 321 aaKnown RBP7.95□□□□□ -1.14
RPD3YNL330C CDC23P16522 626 aa7.95□□□□□ -1.14
RPD3YNL330C MSS1P32559 526 aaPredicted RBP7.95□□□□□ -1.14
RPD3YNL330C PAU2P32612 120 aa7.95□□□□□ -1.14
RPD3YNL330C YEF1P32622 495 aa7.95□□□□□ -1.14
RPD3YNL330C SFA1P32771 386 aa7.95□□□□□ -1.14
RPD3YNL330C HXT5P38695 592 aa7.95□□□□□ -1.14
RPD3YNL330C ECM34P38728 170 aa7.95□□□□□ -1.14
RPD3YNL330C FET3P38993 636 aa7.95□□□□□ -1.14
RPD3YNL330C PTI1P39927 425 aaPredicted RBP7.95□□□□□ -1.14
RPD3YNL330C YIL166CP40445 542 aa7.95□□□□□ -1.14
RPD3YNL330C HIS6P40545 261 aa7.95□□□□□ -1.14
RPD3YNL330C MID1P41821 548 aa7.95□□□□□ -1.14
RPD3YNL330C SAM37P50110 327 aa7.95□□□□□ -1.14
RPD3YNL330C CWC25P53854 179 aaKnown RBP7.95□□□□□ -1.14
RPD3YNL330C RHO3Q00245 231 aaKnown RBP7.95□□□□□ -1.14
RPD3YNL330C YPL113CQ02961 396 aa7.95□□□□□ -1.14
RPD3YNL330C DML1Q03652 475 aa7.95□□□□□ -1.14
RPD3YNL330C YMR252CQ04814 134 aa7.95□□□□□ -1.14
RPD3YNL330C SNT309Q06091 175 aaPredicted RBP7.95□□□□□ -1.14
RPD3YNL330C YDL177CQ12257 170 aa7.95□□□□□ -1.14
RPD3YNL330C GLO4Q12320 285 aa7.95□□□□□ -1.14
RPD3YNL330C PDA1P16387 420 aaKnown RBP7.94□□□□□ -1.14
RPD3YNL330C AAC3P18238 307 aa7.94□□□□□ -1.14
RPD3YNL330C ACB1P31787 87 aa7.94□□□□□ -1.14
RPD3YNL330C HRB1P38922 454 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
RPD3YNL330C BAP3P41815 604 aa7.94□□□□□ -1.14
RPD3YNL330C PMT6P42934 759 aa7.94□□□□□ -1.14
RPD3YNL330C ALK1P43633 760 aaKnown RBP7.94□□□□□ -1.14
RPD3YNL330C LSM1P47017 172 aaKnown RBP7.94□□□□□ -1.14
RPD3YNL330C YGL235WP53071 178 aa7.94□□□□□ -1.14
RPD3YNL330C POP6P53218 158 aa7.94□□□□□ -1.14
RPD3YNL330C REC102Q02721 264 aa7.94□□□□□ -1.14
RPD3YNL330C HLR1Q04429 423 aa7.94□□□□□ -1.14
RPD3YNL330C YML096WQ04489 525 aa7.94□□□□□ -1.14
RPD3YNL330C SKM1Q12469 655 aa7.94□□□□□ -1.14
RPD3YNL330C PSF1Q12488 208 aa7.94□□□□□ -1.14
RPD3YNL330C NAG1Q8TGN9 163 aa7.94□□□□□ -1.14
RPD3YNL330C KIN28P06242 306 aa7.93□□□□□ -1.14
RPD3YNL330C GAL7P08431 366 aa7.93□□□□□ -1.14
RPD3YNL330C UTR1P21373 530 aa7.93□□□□□ -1.14
RPD3YNL330C PUT3P25502 979 aaPredicted RBP7.93□□□□□ -1.14
RPD3YNL330C FUN19P28003 413 aaPredicted RBP7.93□□□□□ -1.14
RPD3YNL330C SRB5P32585 307 aa7.93□□□□□ -1.14
RPD3YNL330C EHT1P38295 451 aa7.93□□□□□ -1.14
RPD3YNL330C YHR122WP38829 231 aa7.93□□□□□ -1.14
RPD3YNL330C PTH1P38876 190 aaKnown RBP7.93□□□□□ -1.14
RPD3YNL330C POP1P41812 875 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms