RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W NSG1P38837 291 aa5.41□□□□□ -1.54
ATG4YNL223W SKN7P38889 622 aa5.41□□□□□ -1.54
ATG4YNL223W YJL218WP40892 196 aaKnown RBP5.41□□□□□ -1.54
ATG4YNL223W MDE1P47095 244 aa5.41□□□□□ -1.54
ATG4YNL223W LCL3P53153 274 aa5.41□□□□□ -1.54
ATG4YNL223W BUD9P53226 547 aa5.41□□□□□ -1.54
ATG4YNL223W MKC7P53379 596 aa5.41□□□□□ -1.54
ATG4YNL223W YNR062CP53748 327 aa5.41□□□□□ -1.54
ATG4YNL223W YLR460CP54007 376 aa5.41□□□□□ -1.54
ATG4YNL223W CIK1Q01649 594 aa5.41□□□□□ -1.54
ATG4YNL223W PLM2Q04383 521 aa5.41□□□□□ -1.54
ATG4YNL223W SNO4Q04902 237 aa5.41□□□□□ -1.54
ATG4YNL223W FRE5Q08908 694 aa5.41□□□□□ -1.54
ATG4YNL223W HSP33Q08914 237 aaKnown RBP5.41□□□□□ -1.54
ATG4YNL223W RKM1Q08961 583 aaPredicted RBP5.41□□□□□ -1.54
ATG4YNL223W HSP32Q08992 237 aa5.41□□□□□ -1.54
ATG4YNL223W REX3Q12090 404 aa5.41□□□□□ -1.54
ATG4YNL223W LSO1Q3E827 93 aa5.41□□□□□ -1.54
ATG4YNL223W FLP1P03870 423 aa5.4□□□□□ -1.54
ATG4YNL223W HAP4P14064 554 aa5.4□□□□□ -1.54
ATG4YNL223W TEC1P18412 486 aa5.4□□□□□ -1.54
ATG4YNL223W DAL82P21705 255 aa5.4□□□□□ -1.54
ATG4YNL223W YCL002CP25565 263 aa5.4□□□□□ -1.54
ATG4YNL223W HSP30P25619 332 aa5.4□□□□□ -1.54
ATG4YNL223W EMP70P32802 667 aa5.4□□□□□ -1.54
ATG4YNL223W SEC66P33754 206 aa5.4□□□□□ -1.54
ATG4YNL223W JEN1P36035 616 aa5.4□□□□□ -1.54
ATG4YNL223W MRPL16P38064 232 aa5.4□□□□□ -1.54
ATG4YNL223W FCY21P40039 528 aa5.4□□□□□ -1.54
ATG4YNL223W YNL208WP40159 199 aaKnown RBP5.4□□□□□ -1.54
ATG4YNL223W YIL067CP40514 678 aa5.4□□□□□ -1.54
ATG4YNL223W BAP3P41815 604 aa5.4□□□□□ -1.54
ATG4YNL223W PFS2P42841 465 aaKnown RBP5.4□□□□□ -1.54
ATG4YNL223W SNO3P43544 222 aa5.4□□□□□ -1.54
ATG4YNL223W MDV1P47025 714 aa5.4□□□□□ -1.54
ATG4YNL223W YAE1P47118 141 aaPredicted RBP5.4□□□□□ -1.54
ATG4YNL223W YJR115WP47152 169 aa5.4□□□□□ -1.54
ATG4YNL223W CWC23P52868 283 aaPredicted RBP5.4□□□□□ -1.54
ATG4YNL223W RAI1P53063 387 aaKnown RBP5.4□□□□□ -1.54
ATG4YNL223W FDC1Q03034 503 aa5.4□□□□□ -1.54
ATG4YNL223W SPC19Q03954 165 aa5.4□□□□□ -1.54
ATG4YNL223W PAL1Q05518 499 aaKnown RBP5.4□□□□□ -1.54
ATG4YNL223W CYK3Q07533 885 aa5.4□□□□□ -1.54
ATG4YNL223W AVO1Q08236 1176 aa5.4□□□□□ -1.54
ATG4YNL223W RCN2Q12044 265 aa5.4□□□□□ -1.54
ATG4YNL223W YIL046W-AQ3E7Z4 54 aa5.4□□□□□ -1.54
ATG4YNL223W YEL009C-AA0A023PZF2 135 aa5.39□□□□□ -1.55
ATG4YNL223W COX1P00401 534 aa5.39□□□□□ -1.55
ATG4YNL223W ADE5,7P07244 802 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W HOM3P10869 527 aa5.39□□□□□ -1.55
ATG4YNL223W SEC12P11655 471 aa5.39□□□□□ -1.55
ATG4YNL223W FPS1P23900 669 aa5.39□□□□□ -1.55
ATG4YNL223W PRE2P30656 287 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W NIC96P34077 839 aa5.39□□□□□ -1.55
ATG4YNL223W ALG3P38179 458 aa5.39□□□□□ -1.55
ATG4YNL223W OCA5P38738 679 aa5.39□□□□□ -1.55
ATG4YNL223W FMC1P40491 155 aa5.39□□□□□ -1.55
ATG4YNL223W HXT9P40885 567 aa5.39□□□□□ -1.55
ATG4YNL223W CIN1P40987 1014 aa5.39□□□□□ -1.55
ATG4YNL223W SHR5P41912 237 aa5.39□□□□□ -1.55
ATG4YNL223W GDS1P41913 522 aa5.39□□□□□ -1.55
ATG4YNL223W YJL055WP47044 245 aa5.39□□□□□ -1.55
ATG4YNL223W ASK10P48361 1146 aa5.39□□□□□ -1.55
ATG4YNL223W BPL1P48445 690 aaPredicted RBP5.39□□□□□ -1.55
ATG4YNL223W IMD3P50095 523 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W RRN9P53437 365 aa5.39□□□□□ -1.55
ATG4YNL223W HXT11P54862 567 aa5.39□□□□□ -1.55
ATG4YNL223W YKR005CQ02203 525 aa5.39□□□□□ -1.55
ATG4YNL223W NOG1Q02892 647 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W RSM24Q03976 319 aa5.39□□□□□ -1.55
ATG4YNL223W HDA2Q06629 674 aa5.39□□□□□ -1.55
ATG4YNL223W YOL073CQ08232 322 aa5.39□□□□□ -1.55
ATG4YNL223W BDS1Q08347 646 aa5.39□□□□□ -1.55
ATG4YNL223W YDL176WQ12027 708 aa5.39□□□□□ -1.55
ATG4YNL223W PIN2Q12057 282 aa5.39□□□□□ -1.55
ATG4YNL223W MCP1Q12106 302 aa5.39□□□□□ -1.55
ATG4YNL223W YOL114CQ12322 202 aa5.39□□□□□ -1.55
ATG4YNL223W PAR32Q12515 295 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W ARF1P11076 181 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W CDC26P14724 124 aa5.39□□□□□ -1.55
ATG4YNL223W NCP1P16603 691 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W ZRT3P34240 503 aa5.39□□□□□ -1.55
ATG4YNL223W MTC2P34246 357 aa5.39□□□□□ -1.55
ATG4YNL223W GPX1P36014 167 aa5.39□□□□□ -1.55
ATG4YNL223W YKL071WP36086 256 aa5.39□□□□□ -1.55
ATG4YNL223W MAL32P38158 584 aa5.39□□□□□ -1.55
ATG4YNL223W MTC4P38335 694 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W YHK8P38776 514 aa5.39□□□□□ -1.55
ATG4YNL223W NAB3P38996 802 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
ATG4YNL223W UME6P39001 836 aa5.39□□□□□ -1.55
ATG4YNL223W AIM20P40451 204 aa5.39□□□□□ -1.55
ATG4YNL223W HIS6P40545 261 aa5.39□□□□□ -1.55
ATG4YNL223W YFR054CP43622 192 aa5.39□□□□□ -1.55
ATG4YNL223W YJR098CP47139 656 aa5.39□□□□□ -1.55
ATG4YNL223W MAL12P53341 584 aa5.39□□□□□ -1.55
ATG4YNL223W RHO5P53879 331 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W EKI1Q03764 534 aa5.39□□□□□ -1.55
ATG4YNL223W YDR514CQ04408 483 aa5.39□□□□□ -1.55
ATG4YNL223W YMR315WQ04869 349 aaKnown RBP5.39□□□□□ -1.55
ATG4YNL223W SEI1Q06058 285 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms