RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	PCL9	Q12477	304 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	IZH4	Q99393	312 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	RPL15A	P05748	204 aa	Known RBP	4.09	□□□□□ -1.76
BDP1	YNL039W	MRP1	P10662	321 aa	Known RBP	4.09	□□□□□ -1.76
BDP1	YNL039W	NUP2	P32499	720 aa		4.09	□□□□□ -1.76
BDP1	YNL039W	PEX2	P32800	271 aa		4.09	□□□□□ -1.76
BDP1	YNL039W	YKL063C	P35725	167 aa		4.09	□□□□□ -1.76
BDP1	YNL039W	YNL320W	P42840	284 aa		4.09	□□□□□ -1.76
BDP1	YNL039W	HCH1	P53834	153 aa		4.09	□□□□□ -1.76
BDP1	YNL039W	YMR027W	Q04371	470 aa		4.09	□□□□□ -1.76
BDP1	YNL039W	YLR012C	Q07927	99 aa		4.09	□□□□□ -1.76
BDP1	YNL039W	RPL31A	P0C2H8	113 aa	Known RBP	4.08	□□□□□ -1.76
BDP1	YNL039W	MATALPHA1	P0CY06	175 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	HMLALPHA1	P0CY07	175 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	RPL16A	P26784	199 aa	Known RBP	4.08	□□□□□ -1.76
BDP1	YNL039W	ATS1	P31386	333 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	AGA1	P32323	725 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	AVT5	P38176	459 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	ARC40	P38328	384 aa	Known RBP	4.08	□□□□□ -1.76
BDP1	YNL039W	YIL029C	P40538	142 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	LCB3	P47013	409 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	ENT5	Q03769	411 aa	Known RBP	4.08	□□□□□ -1.76
BDP1	YNL039W	THI7	Q05998	598 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	DDC1	Q08949	612 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	MSH5	Q12175	901 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	EAF3	Q12432	401 aa		4.08	□□□□□ -1.76
BDP1	YNL039W	HTZ1	Q12692	134 aa	Known RBP	4.08	□□□□□ -1.76
BDP1	YNL039W	ILV1	P00927	576 aa	Known RBP	4.07	□□□□□ -1.76
BDP1	YNL039W	SPO23	P33757	523 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	RPC37	P36121	282 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	LDB7	P38210	180 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	ECM8	P38246	354 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	WWM1	P43582	211 aa	Known RBP	4.07	□□□□□ -1.76
BDP1	YNL039W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
BDP1	YNL039W	SNX41	Q04053	625 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	SMC5	Q08204	1093 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	RPN6	Q12377	434 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	YBL111C	Q3E7Y5	667 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	SAL1	D6W196	494 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	HIS1	P00498	297 aa	Known RBP	4.07	□□□□□ -1.76
BDP1	YNL039W	PTP1	P25044	335 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	RPS5	P26783	225 aa	Known RBP	4.07	□□□□□ -1.76
BDP1	YNL039W	MGM101	P32787	269 aa	Known RBP	4.07	□□□□□ -1.76
BDP1	YNL039W	ASK1	P35734	292 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	RPH1	P39956	796 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	CIN2	P46670	268 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	PMT4	P46971	762 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	TIS11	P47977	285 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	NUP116	Q02630	1113 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	TDA1	Q03533	586 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	OST6	Q03723	332 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	YDL114W	Q07530	308 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	POM33	Q12164	279 aa		4.07	□□□□□ -1.76
BDP1	YNL039W	REP1	P03871	373 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	CPR1	P14832	162 aa	Known RBP	4.06	□□□□□ -1.76
BDP1	YNL039W	PPA2	P28239	310 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	ASF2	P32448	525 aa	Predicted RBP	4.06	□□□□□ -1.76
BDP1	YNL039W	ATO2	P32907	282 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	RCK2	P38623	610 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	YND1	P40009	630 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	HIT1	P46973	164 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	TAD2	P47058	250 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	MST27	P53176	234 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	SWC4	P53201	476 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	CPD1	P53314	239 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	TRM82	Q03774	444 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	BNA7	Q04066	261 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	VBA1	Q04301	562 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	KRE28	Q04431	385 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	GRS2	Q06817	618 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	YOR387C	Q08910	206 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	FCY22	Q12119	530 aa		4.06	□□□□□ -1.76
BDP1	YNL039W	UTP23	Q12339	254 aa	Known RBP	4.06	□□□□□ -1.76
BDP1	YNL039W	CYC3	P06182	269 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	FUS3	P16892	353 aa	Known RBP	4.05	□□□□□ -1.76
BDP1	YNL039W	RPL16B	P26785	198 aa	Known RBP	4.05	□□□□□ -1.76
BDP1	YNL039W	MET30	P39014	640 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	NPT1	P39683	429 aa	Known RBP	4.05	□□□□□ -1.76
BDP1	YNL039W	DDI1	P40087	428 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	MAM33	P40513	266 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	NCA3	P46955	337 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	YMR010W	Q03687	405 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	YPR091C	Q06833	770 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	CLP1	Q08685	445 aa	Predicted RBP	4.05	□□□□□ -1.76
BDP1	YNL039W	RDL2	Q08742	149 aa	Known RBP	4.05	□□□□□ -1.76
BDP1	YNL039W	SLM3	Q12093	417 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	YDL109C	Q12103	647 aa		4.05	□□□□□ -1.76
BDP1	YNL039W	HEM4	P06174	275 aa		4.04	□□□□□ -1.76
BDP1	YNL039W	NHP6B	P11633	99 aa	Known RBP	4.04	□□□□□ -1.76
BDP1	YNL039W	DAL81	P21657	970 aa		4.04	□□□□□ -1.76
BDP1	YNL039W	RPL24B	P24000	155 aa	Known RBP	4.04	□□□□□ -1.76
BDP1	YNL039W	CHA1	P25379	360 aa	Known RBP	4.04	□□□□□ -1.76
BDP1	YNL039W	PBN1	P25580	416 aa		4.04	□□□□□ -1.76
BDP1	YNL039W	SEC1	P30619	724 aa	Known RBP	4.04	□□□□□ -1.76
BDP1	YNL039W	FUN26	P31381	517 aa		4.04	□□□□□ -1.76
BDP1	YNL039W	CSE1	P33307	960 aa		4.04	□□□□□ -1.76
BDP1	YNL039W	MCH2	P36032	473 aa		4.04	□□□□□ -1.76
BDP1	YNL039W	YER034W	P40022	185 aa	Known RBP	4.04	□□□□□ -1.76
BDP1	YNL039W	YIA6	P40556	373 aa		4.04	□□□□□ -1.76
BDP1	YNL039W	GDS1	P41913	522 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms