RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W DUG3P53871 357 aa3.62□□□□□ -1.83
PUB1YNL016W SMP3Q04174 516 aa3.62□□□□□ -1.83
PUB1YNL016W SPO77Q06134 477 aa3.62□□□□□ -1.83
PUB1YNL016W MSH5Q12175 901 aa3.62□□□□□ -1.83
PUB1YNL016W DAL82P21705 255 aa3.61□□□□□ -1.83
PUB1YNL016W SLM5P25345 492 aaKnown RBP3.61□□□□□ -1.83
PUB1YNL016W ATP7P30902 174 aa3.61□□□□□ -1.83
PUB1YNL016W MRPL9P31334 269 aa3.61□□□□□ -1.83
PUB1YNL016W ZUO1P32527 433 aaKnown RBP3.61□□□□□ -1.83
PUB1YNL016W MRPS5P33759 307 aa3.61□□□□□ -1.83
PUB1YNL016W SRX1P36077 127 aa3.61□□□□□ -1.83
PUB1YNL016W CBP4P37267 147 aa3.61□□□□□ -1.83
PUB1YNL016W RIB1P38066 345 aa3.61□□□□□ -1.83
PUB1YNL016W SHE3P38272 425 aaKnown RBP3.61□□□□□ -1.83
PUB1YNL016W HIS2P38635 335 aa3.61□□□□□ -1.83
PUB1YNL016W WSC4P38739 605 aa3.61□□□□□ -1.83
PUB1YNL016W RTC3P38804 111 aaPredicted RBP3.61□□□□□ -1.83
PUB1YNL016W ARG2P40360 574 aa3.61□□□□□ -1.83
PUB1YNL016W YFL015CP43578 164 aa3.61□□□□□ -1.83
PUB1YNL016W TOS2P50078 622 aa3.61□□□□□ -1.83
PUB1YNL016W SPT20P50875 604 aa3.61□□□□□ -1.83
PUB1YNL016W YGL117WP53133 265 aa3.61□□□□□ -1.83
PUB1YNL016W CPR8P53728 308 aa3.61□□□□□ -1.83
PUB1YNL016W EAF7P53911 425 aaKnown RBP3.61□□□□□ -1.83
PUB1YNL016W GPI15P53961 229 aa3.61□□□□□ -1.83
PUB1YNL016W DIA1P54005 336 aa3.61□□□□□ -1.83
PUB1YNL016W ASI1P54074 624 aa3.61□□□□□ -1.83
PUB1YNL016W RVB1Q03940 463 aaKnown RBP3.61□□□□□ -1.83
PUB1YNL016W KRE28Q04431 385 aa3.61□□□□□ -1.83
PUB1YNL016W ADH6Q04894 360 aaKnown RBP3.61□□□□□ -1.83
PUB1YNL016W SEY1Q99287 776 aa3.61□□□□□ -1.83
PUB1YNL016W CSF1Q12150 2958 aa3.6□□□□□ -1.83
PUB1YNL016W MEC1P38111 2368 aa3.6□□□□□ -1.83
PUB1YNL016W YER145C-AA0A023PYF4 145 aa3.6□□□□□ -1.83
PUB1YNL016W HIS4P00815 799 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W MES1P00958 751 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W ARF1P11076 181 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W ISY1P21374 235 aaPredicted RBP3.6□□□□□ -1.83
PUB1YNL016W YSR3P23501 404 aa3.6□□□□□ -1.83
PUB1YNL016W PUT3P25502 979 aaPredicted RBP3.6□□□□□ -1.83
PUB1YNL016W VMA6P32366 345 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W SKN1P33336 771 aa3.6□□□□□ -1.83
PUB1YNL016W LST4P34239 828 aa3.6□□□□□ -1.83
PUB1YNL016W MAK5P38112 773 aaPredicted RBP3.6□□□□□ -1.83
PUB1YNL016W LAG1P38703 411 aa3.6□□□□□ -1.83
PUB1YNL016W BAT1P38891 393 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W SUR2P38992 349 aa3.6□□□□□ -1.83
PUB1YNL016W MIT1P40002 666 aa3.6□□□□□ -1.83
PUB1YNL016W SHO1P40073 367 aa3.6□□□□□ -1.83
PUB1YNL016W COA1P40452 197 aa3.6□□□□□ -1.83
PUB1YNL016W RPC17P47076 161 aa3.6□□□□□ -1.83
PUB1YNL016W NAS6P50086 228 aa3.6□□□□□ -1.83
PUB1YNL016W PKP2P53170 491 aa3.6□□□□□ -1.83
PUB1YNL016W MKC7P53379 596 aa3.6□□□□□ -1.83
PUB1YNL016W SMM1P53720 384 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W YIF1P53845 314 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W MPS1P54199 764 aa3.6□□□□□ -1.83
PUB1YNL016W YMR034CQ05131 434 aaPredicted RBP3.6□□□□□ -1.83
PUB1YNL016W BER1Q06688 274 aaKnown RBP3.6□□□□□ -1.83
PUB1YNL016W LDS2Q08218 356 aa3.6□□□□□ -1.83
PUB1YNL016W YLR049CQ12110 428 aa3.6□□□□□ -1.83
PUB1YNL016W YLL056CQ12177 298 aa3.6□□□□□ -1.83
PUB1YNL016W RAD7P06779 565 aa3.59□□□□□ -1.83
PUB1YNL016W RPL27AP0C2H6 136 aaKnown RBP3.59□□□□□ -1.83
PUB1YNL016W RPL27BP0C2H7 136 aaKnown RBP3.59□□□□□ -1.83
PUB1YNL016W RPL35AP0CX84 120 aaKnown RBP3.59□□□□□ -1.83
PUB1YNL016W RPL35BP0CX85 120 aaKnown RBP3.59□□□□□ -1.83
PUB1YNL016W BAR1P12630 587 aa3.59□□□□□ -1.83
PUB1YNL016W VMA5P31412 392 aaKnown RBP3.59□□□□□ -1.83
PUB1YNL016W APE2P32454 952 aaKnown RBP3.59□□□□□ -1.83
PUB1YNL016W MUD1P32605 298 aaKnown RBP3.59□□□□□ -1.83
PUB1YNL016W PRP18P33411 251 aaPredicted RBP3.59□□□□□ -1.83
PUB1YNL016W VPS51P36116 164 aa3.59□□□□□ -1.83
PUB1YNL016W ATG12P38316 186 aa3.59□□□□□ -1.83
PUB1YNL016W AVT2P39981 480 aa3.59□□□□□ -1.83
PUB1YNL016W FAU1P40099 211 aa3.59□□□□□ -1.83
PUB1YNL016W NDC80P40460 691 aa3.59□□□□□ -1.83
PUB1YNL016W AGP3P43548 558 aa3.59□□□□□ -1.83
PUB1YNL016W ABM1P47146 123 aa3.59□□□□□ -1.83
PUB1YNL016W TDA7P53882 636 aaPredicted RBP3.59□□□□□ -1.83
PUB1YNL016W SMX3P54999 86 aaPredicted RBP3.59□□□□□ -1.83
PUB1YNL016W RIM13Q03792 727 aa3.59□□□□□ -1.83
PUB1YNL016W YDR387CQ04162 555 aa3.59□□□□□ -1.83
PUB1YNL016W NAT4Q04751 285 aa3.59□□□□□ -1.83
PUB1YNL016W YDR222WQ04925 415 aa3.59□□□□□ -1.83
PUB1YNL016W CDC123Q05791 360 aa3.59□□□□□ -1.83
PUB1YNL016W ASA1Q06822 443 aa3.59□□□□□ -1.83
PUB1YNL016W TLG2Q08144 397 aa3.59□□□□□ -1.83
PUB1YNL016W BRR2P32639 2163 aaKnown RBP3.59□□□□□ -1.84
PUB1YNL016W THP2O13539 261 aaKnown RBP3.58□□□□□ -1.84
PUB1YNL016W ATP6P00854 259 aa3.58□□□□□ -1.84
PUB1YNL016W RPL7AP05737 244 aaKnown RBP3.58□□□□□ -1.84
PUB1YNL016W RAD1P06777 1100 aa3.58□□□□□ -1.84
PUB1YNL016W PPR1P07272 904 aaPredicted RBP3.58□□□□□ -1.84
PUB1YNL016W STE18P18852 110 aa3.58□□□□□ -1.84
PUB1YNL016W PMA2P19657 947 aa3.58□□□□□ -1.84
PUB1YNL016W FAR1P21268 830 aa3.58□□□□□ -1.84
PUB1YNL016W UTR1P21373 530 aa3.58□□□□□ -1.84
PUB1YNL016W ERG4P25340 473 aa3.58□□□□□ -1.84
PUB1YNL016W UBC6P33296 250 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms