RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	CCT7	P42943	550 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	EXG2	P52911	562 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	LSG1	P53145	640 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	YGR066C	P53242	292 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	DCP2	P53550	970 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	DIA2	Q08496	732 aa	Predicted RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	SWM1	Q12379	170 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	SFG1	Q12507	346 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	HIR2	P32480	875 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	TEF4	P36008	412 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	YMR262W	P38430	313 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	RCK1	P38622	512 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	ECM10	P39987	644 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	ALG5	P40350	334 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	HPM1	P40481	377 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	ECL1	P48235	211 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	COS6	P53344	381 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	DBP6	P53734	629 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	YNR068C	P53754	272 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	DSL1	P53847	754 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	FMN1	Q03778	218 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	YDR249C	Q03787	373 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	SNX41	Q04053	625 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	YKU80	Q04437	629 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	TRI1	Q05024	226 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	BUR2	Q05949	395 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	TY1A-NL1	Q12391	440 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	PUT2	P07275	575 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	SAM35	P14693	329 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	YCK1	P23291	538 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	POL4	P25615	582 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	YEF1	P32622	495 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	RIB7	P33312	244 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	ROT2	P38138	954 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	TDP1	P38319	544 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	SSY5	P47002	699 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	TOS2	P50078	622 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	RHO5	P53879	331 aa	Known RBP	4.21	□□□□□ -1.74
ATM1	YMR301C	INN1	P53901	409 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	RSN1	Q03516	953 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	RIM13	Q03792	727 aa		4.21	□□□□□ -1.74
ATM1	YMR301C	HRI1	Q05905	244 aa	Known RBP	4.21	□□□□□ -1.74
ATM1	YMR301C	FOL3	Q12676	427 aa	Predicted RBP	4.21	□□□□□ -1.74
ATM1	YMR301C	CBP6	P07253	162 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	CLB3	P24870	427 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	YIM1	P28625	365 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	MTR2	P34232	184 aa	Known RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	YKR073C	P36153	106 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	RFC3	P38629	340 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	SHO1	P40073	367 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	PCL7	P40186	285 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	IMA5	P40884	581 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	TRS85	P46944	698 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	EKI1	Q03764	534 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	YRA1	Q12159	226 aa	Known RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	YOR097C	Q12274	175 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	REC107	P21651	314 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	MDH2	P22133	377 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	GAS1	P22146	559 aa	Known RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	DPH5	P32469	300 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	TSC10	P38342	320 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	MNN9	P39107	395 aa	Known RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	MTW1	P39731	289 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	YNL195C	P40168	261 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	ARF3	P40994	183 aa	RIP-Chip data	4.2	□□□□□ -1.74	not detected
ATM1	YMR301C	PXR1	P53335	271 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	OGG1	P53397	376 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	MTQ1	P53944	314 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	RSC9	Q03124	581 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	RSM28	Q03430	361 aa		4.2	□□□□□ -1.74
ATM1	YMR301C	SSQ1	Q05931	657 aa	Predicted RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	RIB2	Q12362	591 aa	Known RBP	4.2	□□□□□ -1.74
ATM1	YMR301C	ATP6	P00854	259 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	MF(ALPHA)1	P01149	165 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	TPK2	P06245	380 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	AIM17	P23180	465 aa	Known RBP	4.19	□□□□□ -1.74
ATM1	YMR301C	RPS1B	P23248	255 aa	Known RBP	4.19	□□□□□ -1.74
ATM1	YMR301C	RPI1	P23250	407 aa	Known RBP	4.19	□□□□□ -1.74
ATM1	YMR301C	IST2	P38250	946 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	MTC4	P38335	694 aa	Known RBP	4.19	□□□□□ -1.74
ATM1	YMR301C	PEX18	P38855	283 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	MMT1	Q03218	510 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	RSM24	Q03976	319 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	YOR352W	Q08816	343 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	PSY3	Q12318	242 aa		4.19	□□□□□ -1.74
ATM1	YMR301C	PDX1	P16451	410 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	NTG1	P31378	399 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	ACP1	P32463	125 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	YGP1	P38616	354 aa	Known RBP	4.18	□□□□□ -1.74
ATM1	YMR301C	BIG1	P38813	335 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	FAD1	P38913	306 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	SEN34	P39707	275 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	IAH1	P41734	238 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	DIA3	P52290	468 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	USE1	P53146	245 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	BUD9	P53226	547 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	YNL181W	P53878	407 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	URC2	Q04411	772 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	COX20	Q04935	205 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	ENB1	Q08299	606 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 122.6 ms