RNA–Protein interactions for RNA: YMR091C

NPL6, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene NPL6, Length 1,308 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL6	YMR091C	BNS1	P50084	137 aa		5.23	□□□□□ -1.57
NPL6	YMR091C	YHC1	Q05900	231 aa	Known RBP	5.23	□□□□□ -1.57
NPL6	YMR091C	FDH1	Q08911	376 aa		5.23	□□□□□ -1.57
NPL6	YMR091C	APC9	Q12107	265 aa		5.23	□□□□□ -1.57
NPL6	YMR091C	IZH4	Q99393	312 aa		5.23	□□□□□ -1.57
NPL6	YMR091C	MIR1	P23641	311 aa	Known RBP	5.23	□□□□□ -1.57
NPL6	YMR091C	MOB2	P43563	287 aa		5.23	□□□□□ -1.57
NPL6	YMR091C	ATG18	P43601	500 aa		5.23	□□□□□ -1.57
NPL6	YMR091C	SPP2	Q02521	185 aa		5.23	□□□□□ -1.57
NPL6	YMR091C	FRS2	P15625	503 aa	Known RBP	5.22	□□□□□ -1.57
NPL6	YMR091C	SKG6	P32900	734 aa	Predicted RBP	5.22	□□□□□ -1.57
NPL6	YMR091C	SCC4	P40090	624 aa		5.22	□□□□□ -1.57
NPL6	YMR091C	AGP3	P43548	558 aa		5.22	□□□□□ -1.57
NPL6	YMR091C	YFL040W	P43562	540 aa		5.22	□□□□□ -1.57
NPL6	YMR091C	FMP33	P46998	180 aa		5.22	□□□□□ -1.57
NPL6	YMR091C	SED5	Q01590	340 aa		5.22	□□□□□ -1.57
NPL6	YMR091C	YLR012C	Q07927	99 aa		5.22	□□□□□ -1.57
NPL6	YMR091C	RDL2	Q08742	149 aa	Known RBP	5.22	□□□□□ -1.57
NPL6	YMR091C	ATP16	Q12165	160 aa		5.22	□□□□□ -1.57
NPL6	YMR091C	REP1	P03871	373 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	RSR1	P13856	272 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	YSR3	P23501	404 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	GIT1	P25346	518 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	IME2	P32581	645 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	PMT4	P46971	762 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	AIM23	P47015	356 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	SUR7	P54003	302 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	TIM11	P81449	96 aa	Predicted RBP	5.21	□□□□□ -1.58
NPL6	YMR091C	GPN3	Q06543	272 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	PLP2	Q12017	286 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	YOL107W	Q12239	342 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	SFM1	Q12314	213 aa		5.21	□□□□□ -1.58
NPL6	YMR091C	RVS161	P25343	265 aa	Known RBP	5.2	□□□□□ -1.58
NPL6	YMR091C	COY1	P34237	679 aa		5.2	□□□□□ -1.58
NPL6	YMR091C	KTI12	P34253	313 aa	Known RBP	5.2	□□□□□ -1.58
NPL6	YMR091C	COS9	P36034	407 aa		5.2	□□□□□ -1.58
NPL6	YMR091C	YER186C	P40101	306 aa		5.2	□□□□□ -1.58
NPL6	YMR091C	AGX1	P43567	385 aa		5.2	□□□□□ -1.58
NPL6	YMR091C	IMP4	P53941	290 aa	Known RBP	5.2	□□□□□ -1.58
NPL6	YMR091C	SKI8	Q02793	397 aa	Predicted RBP	5.2	□□□□□ -1.58
NPL6	YMR091C	YPL077C	Q02831	240 aa		5.2	□□□□□ -1.58
NPL6	YMR091C	SNX41	Q04053	625 aa		5.2	□□□□□ -1.58
NPL6	YMR091C	SSK22	P25390	1331 aa	Predicted RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	ATP6	P00854	259 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	PHO2	P07269	559 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	CBS2	P14905	389 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	AAT2	P23542	418 aa	Known RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	PMT2	P31382	759 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	NUP2	P32499	720 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	GCG1	P32656	232 aa	Known RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	RPT5	P33297	434 aa	Known RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	OXA1	P39952	402 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	AIM10	P39965	576 aa	Known RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	LIA1	P47120	325 aa	Known RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	YGL242C	P53066	181 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	SLT2	Q00772	484 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	GMC2	Q06201	188 aa		5.19	□□□□□ -1.58
NPL6	YMR091C	DTD1	Q07648	150 aa	Known RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	UTP23	Q12339	254 aa	Known RBP	5.19	□□□□□ -1.58
NPL6	YMR091C	SAL1	D6W196	494 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	RPS14A	P06367	137 aa	Known RBP	5.18	□□□□□ -1.58
NPL6	YMR091C	ERD1	P16151	362 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	URA10	P30402	227 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	MRPL10	P36520	322 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	RPS14B	P39516	138 aa	Known RBP	5.18	□□□□□ -1.58
NPL6	YMR091C	KAP114	P53067	1004 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	SWC4	P53201	476 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	VAC7	P53950	1165 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	PRP38	Q00723	242 aa	Predicted RBP	5.18	□□□□□ -1.58
NPL6	YMR091C	RNH1	Q04740	348 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	YLR173W	Q06247	608 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	ASR1	Q06834	288 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	TAF10	Q12030	206 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	MCT1	Q12283	360 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	MED4	Q12343	284 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	PRM4	Q12498	284 aa		5.18	□□□□□ -1.58
NPL6	YMR091C	STE7	P06784	515 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	SPS100	P13130	326 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	HPR1	P17629	752 aa	Known RBP	5.17	□□□□□ -1.58
NPL6	YMR091C	RPL16B	P26785	198 aa	Known RBP	5.17	□□□□□ -1.58
NPL6	YMR091C	YKL063C	P35725	167 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	SLM1	P40485	686 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	SNM1	P40993	198 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	MEP2	P41948	499 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	YET2	Q04210	160 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	MRX9	Q07349	420 aa	Known RBP	5.17	□□□□□ -1.58
NPL6	YMR091C	BTS1	Q12051	335 aa		5.17	□□□□□ -1.58
NPL6	YMR091C	ILV1	P00927	576 aa	Known RBP	5.16	□□□□□ -1.58
NPL6	YMR091C	RPL31A	P0C2H8	113 aa	Known RBP	5.16	□□□□□ -1.58
NPL6	YMR091C	YKL071W	P36086	256 aa		5.16	□□□□□ -1.58
NPL6	YMR091C	PEX22	P39718	180 aa		5.16	□□□□□ -1.58
NPL6	YMR091C	HEM14	P40012	539 aa		5.16	□□□□□ -1.58
NPL6	YMR091C	YPI1	P43587	155 aa		5.16	□□□□□ -1.58
NPL6	YMR091C	RRP42	Q12277	265 aa	Predicted RBP	5.16	□□□□□ -1.58
NPL6	YMR091C	PDC2	P32896	925 aa		5.15	□□□□□ -1.59
NPL6	YMR091C	YIA6	P40556	373 aa		5.15	□□□□□ -1.59
NPL6	YMR091C	POM33	Q12164	279 aa		5.15	□□□□□ -1.59
NPL6	YMR091C	MHP1	P43638	1398 aa		5.14	□□□□□ -1.59
NPL6	YMR091C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
NPL6	YMR091C	VPS1	P21576	704 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms