RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W PUP2P32379 260 aa1.71□□□□□ -2.14
CTK3YML112W UTR5P32630 166 aa1.71□□□□□ -2.14
CTK3YML112W KTI12P34253 313 aaKnown RBP1.71□□□□□ -2.14
CTK3YML112W DAD2P36162 133 aa1.71□□□□□ -2.14
CTK3YML112W SMF2P38778 549 aa1.71□□□□□ -2.14
CTK3YML112W ATG7P38862 630 aa1.71□□□□□ -2.14
CTK3YML112W RPA34P47006 233 aaPredicted RBP1.71□□□□□ -2.14
CTK3YML112W YDR114CQ04597 100 aa1.71□□□□□ -2.14
CTK3YML112W NAT4Q04751 285 aa1.71□□□□□ -2.14
CTK3YML112W YPR063CQ12160 140 aa1.71□□□□□ -2.14
CTK3YML112W YLL053CP0CD98 152 aa1.7□□□□□ -2.14
CTK3YML112W UBA1P22515 1024 aaKnown RBP1.7□□□□□ -2.14
CTK3YML112W FAA1P30624 700 aaKnown RBP1.7□□□□□ -2.14
CTK3YML112W MKK1P32490 508 aa1.7□□□□□ -2.14
CTK3YML112W PPQ1P32945 549 aa1.7□□□□□ -2.14
CTK3YML112W CSE1P33307 960 aa1.7□□□□□ -2.14
CTK3YML112W RFT1P38206 574 aaPredicted RBP1.7□□□□□ -2.14
CTK3YML112W IST2P38250 946 aa1.7□□□□□ -2.14
CTK3YML112W RCK1P38622 512 aa1.7□□□□□ -2.14
CTK3YML112W LSG1P53145 640 aaKnown RBP1.7□□□□□ -2.14
CTK3YML112W CAX4P53223 239 aa1.7□□□□□ -2.14
CTK3YML112W FMP48P53233 369 aa1.7□□□□□ -2.14
CTK3YML112W YNR068CP53754 272 aa1.7□□□□□ -2.14
CTK3YML112W YMR244WQ04018 355 aa1.7□□□□□ -2.14
CTK3YML112W CSM3Q04659 317 aa1.7□□□□□ -2.14
CTK3YML112W ECM19Q06011 112 aa1.7□□□□□ -2.14
CTK3YML112W TAF10Q12030 206 aa1.7□□□□□ -2.14
CTK3YML112W GRR1P24814 1151 aa1.69□□□□□ -2.14
CTK3YML112W ERG9P29704 444 aa1.69□□□□□ -2.14
CTK3YML112W TKL2P33315 681 aa1.69□□□□□ -2.14
CTK3YML112W MRPS5P33759 307 aa1.69□□□□□ -2.14
CTK3YML112W ZRT3P34240 503 aa1.69□□□□□ -2.14
CTK3YML112W SDH4P37298 181 aa1.69□□□□□ -2.14
CTK3YML112W CTM1P38818 585 aa1.69□□□□□ -2.14
CTK3YML112W ECM14P38836 430 aa1.69□□□□□ -2.14
CTK3YML112W YHC3P47040 408 aa1.69□□□□□ -2.14
CTK3YML112W YGL118CP53132 145 aa1.69□□□□□ -2.14
CTK3YML112W DTD1Q07648 150 aaKnown RBP1.69□□□□□ -2.14
CTK3YML112W RLP24Q07915 199 aaKnown RBP1.69□□□□□ -2.14
CTK3YML112W PRP46Q12417 451 aaPredicted RBP1.69□□□□□ -2.14
CTK3YML112W ERP4Q12450 207 aa1.69□□□□□ -2.14
CTK3YML112W NBL1Q3E7Y6 73 aa1.69□□□□□ -2.14
CTK3YML112W PHO84P25297 587 aaKnown RBP1.68□□□□□ -2.14
CTK3YML112W RBK1P25332 333 aa1.68□□□□□ -2.14
CTK3YML112W MXR2P25566 168 aa1.68□□□□□ -2.14
CTK3YML112W RDS1P25611 832 aa1.68□□□□□ -2.14
CTK3YML112W INO2P26798 304 aa1.68□□□□□ -2.14
CTK3YML112W RPB9P27999 122 aa1.68□□□□□ -2.14
CTK3YML112W RRG9P40156 214 aa1.68□□□□□ -2.14
CTK3YML112W YMR134WP40207 237 aa1.68□□□□□ -2.14
CTK3YML112W YGR016WP53209 190 aa1.68□□□□□ -2.14
CTK3YML112W SPH1Q06160 661 aa1.68□□□□□ -2.14
CTK3YML112W RPN6Q12377 434 aa1.68□□□□□ -2.14
CTK3YML112W AIM45Q12480 344 aaKnown RBP1.68□□□□□ -2.14
CTK3YML112W DFM1Q12743 341 aaKnown RBP1.68□□□□□ -2.14
CTK3YML112W MEI5P32489 222 aa1.67□□□□□ -2.14
CTK3YML112W ALK2P32789 676 aaPredicted RBP1.67□□□□□ -2.14
CTK3YML112W YKL187CP34231 750 aa1.67□□□□□ -2.14
CTK3YML112W IML3P38265 245 aa1.67□□□□□ -2.14
CTK3YML112W YSW1P38280 609 aa1.67□□□□□ -2.14
CTK3YML112W PES4P39684 611 aa1.67□□□□□ -2.14
CTK3YML112W SLM1P40485 686 aa1.67□□□□□ -2.14
CTK3YML112W SHE4P51534 789 aa1.67□□□□□ -2.14
CTK3YML112W YGL088WP53151 121 aa1.67□□□□□ -2.14
CTK3YML112W DIB1Q06819 143 aaPredicted RBP1.67□□□□□ -2.14
CTK3YML112W TFC7Q12415 435 aa1.67□□□□□ -2.14
CTK3YML112W DCC1P25559 380 aa1.66□□□□□ -2.14
CTK3YML112W MYO3P36006 1272 aa1.66□□□□□ -2.14
CTK3YML112W YKR032WP36127 104 aa1.66□□□□□ -2.14
CTK3YML112W RXT2P38255 430 aa1.66□□□□□ -2.14
CTK3YML112W MED8P38304 223 aa1.66□□□□□ -2.14
CTK3YML112W YGP1P38616 354 aaKnown RBP1.66□□□□□ -2.14
CTK3YML112W SCC4P40090 624 aa1.66□□□□□ -2.14
CTK3YML112W YCH1P42937 148 aa1.66□□□□□ -2.14
CTK3YML112W ECO1P43605 281 aa1.66□□□□□ -2.14
CTK3YML112W HSH155P49955 971 aaKnown RBP1.66□□□□□ -2.14
CTK3YML112W YNL146WP53906 100 aa1.66□□□□□ -2.14
CTK3YML112W YPL113CQ02961 396 aa1.66□□□□□ -2.14
CTK3YML112W RCF1Q03713 159 aa1.66□□□□□ -2.14
CTK3YML112W GTO3Q04806 366 aa1.66□□□□□ -2.14
CTK3YML112W YPL245WQ12179 454 aaKnown RBP1.66□□□□□ -2.14
CTK3YML112W IES3Q12345 250 aa1.66□□□□□ -2.14
CTK3YML112W SKS1Q12505 502 aa1.66□□□□□ -2.14
CTK3YML112W UTR1P21373 530 aa1.65□□□□□ -2.15
CTK3YML112W HXT2P23585 541 aa1.65□□□□□ -2.15
CTK3YML112W CIN8P27895 1000 aa1.65□□□□□ -2.15
CTK3YML112W MMS21P38632 267 aa1.65□□□□□ -2.15
CTK3YML112W ASP1P38986 381 aaPredicted RBP1.65□□□□□ -2.15
CTK3YML112W SDS23P53172 527 aa1.65□□□□□ -2.15
CTK3YML112W CDD1Q06549 142 aa1.65□□□□□ -2.15
CTK3YML112W MRX9Q07349 420 aaKnown RBP1.65□□□□□ -2.15
CTK3YML112W YPL264CQ08980 353 aa1.65□□□□□ -2.15
CTK3YML112W PRM4Q12498 284 aa1.65□□□□□ -2.15
CTK3YML112W RAD1P06777 1100 aa1.64□□□□□ -2.15
CTK3YML112W VPS1P21576 704 aaKnown RBP1.64□□□□□ -2.15
CTK3YML112W MRPL20P22354 195 aaPredicted RBP1.64□□□□□ -2.15
CTK3YML112W MIG1P27705 504 aa1.64□□□□□ -2.15
CTK3YML112W VMA5P31412 392 aaKnown RBP1.64□□□□□ -2.15
CTK3YML112W PEX32P38292 413 aa1.64□□□□□ -2.15
CTK3YML112W YHR122WP38829 231 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms