RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	PHB2	P50085	310 aa		11.49	□□□□□ -0.57
BDF1	YLR399C	JIP4	Q03361	876 aa		11.49	□□□□□ -0.57
BDF1	YLR399C	PLM2	Q04383	521 aa		11.49	□□□□□ -0.57
BDF1	YLR399C	GAS2	Q06135	555 aa		11.49	□□□□□ -0.57
BDF1	YLR399C	KEI1	Q06346	221 aa		11.49	□□□□□ -0.57
BDF1	YLR399C	TEN1	Q07921	160 aa		11.49	□□□□□ -0.57
BDF1	YLR399C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	11.48	□□□□□ -0.57	not detected
BDF1	YLR399C	PRP18	P33411	251 aa	Predicted RBP	11.48	□□□□□ -0.57
BDF1	YLR399C	MEP3	P53390	489 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	HST3	P53687	447 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	ATG38	Q05789	226 aa	Known RBP	11.48	□□□□□ -0.57
BDF1	YLR399C	CYK3	Q07533	885 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	YPR145C-A	Q2V2P0	78 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	YJR112W-A	Q3E743	109 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	CMC2	Q3E7A4	109 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	YAR066W	P0CX18	203 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	YHR214W	P0CX19	203 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	NAM2	P11325	894 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	POX1	P13711	748 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	SEC22	P22214	214 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	DSS4	P32601	143 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	PTR2	P32901	601 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	PHO11	P35842	467 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	EMC3	P36039	253 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	KAE1	P36132	386 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	PHO12	P38693	467 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	YEL073C	P39974	107 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	SLM1	P40485	686 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	RTS2	P40962	232 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	YGR079W	P53249	370 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	GRC3	Q07845	632 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	AVO1	Q08236	1176 aa		11.48	□□□□□ -0.57
BDF1	YLR399C	CPR5	P35176	225 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	FRE4	P53746	719 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	HLR1	Q04429	423 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	HTS1	P07263	546 aa	Known RBP	11.47	□□□□□ -0.57
BDF1	YLR399C	ADE1	P27616	306 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	ECT1	P33412	323 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	ATG8	P38182	117 aa	RIP-Chip data	11.47	□□□□□ -0.57	not detected
BDF1	YLR399C	AIM24	P47127	394 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	OKP1	P53298	406 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	REC102	Q02721	264 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	PNG1	Q02890	363 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	PIR3	Q03180	325 aa		11.47	□□□□□ -0.57
BDF1	YLR399C	STT4	P37297	1900 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	GCD1	P09032	578 aa	Predicted RBP	11.46	□□□□□ -0.57
BDF1	YLR399C	CHL4	P38907	458 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	PNT1	P38969	423 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	PRP24	P49960	444 aa	Known RBP	11.46	□□□□□ -0.57
BDF1	YLR399C	AMA1	P50082	593 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	ARG5,6	Q01217	863 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	SRP1	Q02821	542 aa	Known RBP	11.46	□□□□□ -0.57
BDF1	YLR399C	TY1A-DR2	Q03964	440 aa	Known RBP	11.46	□□□□□ -0.57
BDF1	YLR399C	TY1A-MR1	Q04215	440 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	TY1A-BL	Q12266	440 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	RRI1	Q12468	440 aa		11.46	□□□□□ -0.57
BDF1	YLR399C	SOD2	P00447	233 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	GLK1	P17709	500 aa	Known RBP	11.45	□□□□□ -0.58
BDF1	YLR399C	ITR1	P30605	584 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	AXL2	P38928	823 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	YJR141W	P47172	347 aa	Predicted RBP	11.45	□□□□□ -0.58
BDF1	YLR399C	YNR065C	P53751	1116 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	UTP15	Q04305	513 aa	Known RBP	11.45	□□□□□ -0.58
BDF1	YLR399C	ZRC1	P20107	442 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	MRPL8	P22353	238 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	MKK1	P32490	508 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	SCM4	P32564	187 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	MIA40	P36046	403 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	CBP4	P37267	147 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	EDS1	P38073	919 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	SRO77	P38163	1010 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	YBR071W	P38243	211 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	PAU12	P53343	120 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	MEH1	Q02205	184 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	PEX25	Q02969	394 aa		11.45	□□□□□ -0.58
BDF1	YLR399C	PUT1	P09368	476 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	HOM3	P10869	527 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	TRX3	P25372	127 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	ATS1	P31386	333 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	HXT4	P32467	576 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	PZF1	P39933	429 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	MET28	P40573	187 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	CAC2	Q04199	468 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	SWF1	Q04629	336 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	SSS1	P35179	80 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	THI2	P38141	450 aa		11.44	□□□□□ -0.58
BDF1	YLR399C	ASP1	P38986	381 aa	Predicted RBP	11.44	□□□□□ -0.58
BDF1	YLR399C	FAA4	P47912	694 aa	Known RBP	11.44	□□□□□ -0.58
BDF1	YLR399C	FMP41	P53889	259 aa	Known RBP	11.44	□□□□□ -0.58
BDF1	YLR399C	RPL34A	P87262	121 aa	Predicted RBP	11.44	□□□□□ -0.58
BDF1	YLR399C	MIH1	P23748	554 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	MGR1	P25573	417 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	YNK1	P36010	153 aa	Known RBP	11.43	□□□□□ -0.58
BDF1	YLR399C	PIG2	P40187	538 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	AGX1	P43567	385 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	SIP4	P46954	829 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	MNT2	P53059	558 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	ERV14	P53173	138 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	YGR015C	P53208	328 aa		11.43	□□□□□ -0.58
BDF1	YLR399C	CSL4	P53859	292 aa	Predicted RBP	11.43	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms