RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	NAT4	Q04751	285 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	ALE1	Q08548	619 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	NFI1	Q12216	726 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	AIM45	Q12480	344 aa	Known RBP	0.74	□□□□□ -2.29
NOP9	YJL010C	VPS63	O13549	108 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	YPR096C	O13587	100 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	CTA1	P15202	515 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	DAP2	P18962	818 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	GRR1	P24814	1151 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	ITR2	P30606	609 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	FAA1	P30624	700 aa	Known RBP	0.74	□□□□□ -2.29
NOP9	YJL010C	MKK1	P32490	508 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	MRPS5	P33759	307 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	SRB2	P34162	210 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	EFM1	P38732	585 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	APE4	P38821	490 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	PRP39	P39682	629 aa	Known RBP	0.74	□□□□□ -2.29
NOP9	YJL010C	ASG7	P46993	209 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	NAS6	P50086	228 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	RPN14	P53196	417 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	UTP6	Q02354	440 aa	Known RBP	0.74	□□□□□ -2.29
NOP9	YJL010C	YMR244W	Q04018	355 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	APC4	Q04601	652 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	YDR018C	Q12185	396 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	MHP1	P43638	1398 aa		0.74	□□□□□ -2.29
NOP9	YJL010C	STF1	P01098	86 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	TAL1	P15019	335 aa	Known RBP	0.73	□□□□□ -2.29
NOP9	YJL010C	CPT1	P17898	393 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	UTR1	P21373	530 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	TRX1	P22217	103 aa	Known RBP	0.73	□□□□□ -2.29
NOP9	YJL010C	HXT2	P23585	541 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	MXR2	P25566	168 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	RDS1	P25611	832 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	CIN8	P27895	1000 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	MEI5	P32489	222 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	ZRT3	P34240	503 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	KTI12	P34253	313 aa	Known RBP	0.73	□□□□□ -2.29
NOP9	YJL010C	MYO3	P36006	1272 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	IST2	P38250	946 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	ALP1	P38971	573 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	COS4	P43542	379 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	YNL143C	P53908	130 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	TAF10	Q12030	206 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	RPN6	Q12377	434 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	TFC7	Q12415	435 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	SKS1	Q12505	502 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	SPO24	Q3E752	67 aa		0.73	□□□□□ -2.29
NOP9	YJL010C	RAD1	P06777	1100 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	CUP2	P15315	225 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	ERD1	P16151	362 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	VMA5	P31412	392 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	ADH5	P38113	351 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	RFT1	P38206	574 aa	Predicted RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	IML3	P38265	245 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	YIL054W	P40524	105 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	YCH1	P42937	148 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	CAX4	P53223	239 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	FMP48	P53233	369 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	YGR168C	P53293	376 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	SMD1	Q02260	146 aa	Predicted RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	GMC1	Q04399	608 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	SPH1	Q06160	661 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	DBP9	Q06218	594 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	HRT1	Q08273	121 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	RPN8	Q08723	338 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	SFG1	Q12507	346 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	DFM1	Q12743	341 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	RPS23A	P0CX29	145 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	RPS23B	P0CX30	145 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	SPS100	P13130	326 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	OPI1	P21957	404 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	MRPL20	P22354	195 aa	Predicted RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
NOP9	YJL010C	CTM1	P38818	585 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	END3	P39013	349 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	SPO73	P40031	143 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	YGL118C	P53132	145 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	TPC1	P53257	314 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	RVB1	Q03940	463 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	VTI1	Q04338	217 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	DTD1	Q07648	150 aa	Known RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	PML1	Q07930	204 aa	Predicted RBP	0.72	□□□□□ -2.29
NOP9	YJL010C	YPR1	Q12458	312 aa		0.72	□□□□□ -2.29
NOP9	YJL010C	RNR2	P09938	399 aa	Known RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	SAG1	P20840	650 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	RPB9	P27999	122 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	ERG9	P29704	444 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	YEL043W	P32618	956 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	PPQ1	P32945	549 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	SIF2	P38262	535 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	RCK1	P38622	512 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	SMF2	P38778	549 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	PES4	P39684	611 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	RRG9	P40156	214 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	YJL144W	P47009	104 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	PDR16	P53860	351 aa	Known RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	ECM19	Q06011	112 aa		0.71	□□□□□ -2.3
NOP9	YJL010C	SAM4	Q08985	325 aa	Known RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	PRP46	Q12417	451 aa	Predicted RBP	0.71	□□□□□ -2.3
NOP9	YJL010C	RAD7	P06779	565 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms