RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeastyeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHR1YIL056W CUS2P53830 285 aaPredicted RBP2.53□□□□□ -2
VHR1YIL056W YNL146WP53906 100 aa2.53□□□□□ -2
VHR1YIL056W MYO5Q04439 1219 aaKnown RBP2.53□□□□□ -2
VHR1YIL056W PRM6Q04705 352 aa2.53□□□□□ -2
VHR1YIL056W YMR310CQ04867 317 aaPredicted RBP2.53□□□□□ -2
VHR1YIL056W BTS1Q12051 335 aa2.53□□□□□ -2
VHR1YIL056W PAA1Q12447 191 aaKnown RBP2.53□□□□□ -2
VHR1YIL056W SPO24Q3E752 67 aa2.53□□□□□ -2
VHR1YIL056W POM152P39685 1337 aa2.52□□□□□ -2.01
VHR1YIL056W MATALPHA1P0CY06 175 aa2.52□□□□□ -2.01
VHR1YIL056W HMLALPHA1P0CY07 175 aa2.52□□□□□ -2.01
VHR1YIL056W MAS1P10507 462 aa2.52□□□□□ -2.01
VHR1YIL056W MSI1P13712 422 aa2.52□□□□□ -2.01
VHR1YIL056W PRR1P28708 518 aa2.52□□□□□ -2.01
VHR1YIL056W IES6P32617 166 aa2.52□□□□□ -2.01
VHR1YIL056W DOA1P36037 715 aa2.52□□□□□ -2.01
VHR1YIL056W ECM8P38246 354 aa2.52□□□□□ -2.01
VHR1YIL056W RTC2P38279 296 aa2.52□□□□□ -2.01
VHR1YIL056W SPP381P38282 291 aaPredicted RBP2.52□□□□□ -2.01
VHR1YIL056W YHR122WP38829 231 aa2.52□□□□□ -2.01
VHR1YIL056W YNL208WP40159 199 aaKnown RBP2.52□□□□□ -2.01
VHR1YIL056W DSN1P40568 576 aa2.52□□□□□ -2.01
VHR1YIL056W YPS6P40583 537 aa2.52□□□□□ -2.01
VHR1YIL056W YAR1P46683 200 aa2.52□□□□□ -2.01
VHR1YIL056W YJL118WP47022 219 aa2.52□□□□□ -2.01
VHR1YIL056W YMR010WQ03687 405 aa2.52□□□□□ -2.01
VHR1YIL056W SNT309Q06091 175 aaPredicted RBP2.52□□□□□ -2.01
VHR1YIL056W SRO7Q12038 1033 aa2.52□□□□□ -2.01
VHR1YIL056W YGK3Q12222 375 aaPredicted RBP2.52□□□□□ -2.01
VHR1YIL056W COX2P00410 251 aa2.52□□□□□ -2.01
VHR1YIL056W MET16P18408 261 aaPredicted RBP2.52□□□□□ -2.01
VHR1YIL056W COQ1P18900 473 aa2.52□□□□□ -2.01
VHR1YIL056W ZRC1P20107 442 aa2.52□□□□□ -2.01
VHR1YIL056W AAT2P23542 418 aaKnown RBP2.52□□□□□ -2.01
VHR1YIL056W PBN1P25580 416 aa2.52□□□□□ -2.01
VHR1YIL056W CIN8P27895 1000 aa2.52□□□□□ -2.01
VHR1YIL056W NUP2P32499 720 aa2.52□□□□□ -2.01
VHR1YIL056W EGD2P38879 174 aaKnown RBP2.52□□□□□ -2.01
VHR1YIL056W PRP39P39682 629 aaKnown RBP2.52□□□□□ -2.01
VHR1YIL056W MIG3P39943 394 aa2.52□□□□□ -2.01
VHR1YIL056W RFC4P40339 323 aaKnown RBP2.52□□□□□ -2.01
VHR1YIL056W LIF1P53150 421 aa2.52□□□□□ -2.01
VHR1YIL056W NOP13P53883 403 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
VHR1YIL056W CMS1Q07897 291 aaKnown RBP2.52□□□□□ -2.01
VHR1YIL056W FDH1Q08911 376 aa2.52□□□□□ -2.01
VHR1YIL056W VIK1Q12045 647 aa2.52□□□□□ -2.01
VHR1YIL056W YDR262WQ12331 272 aa2.52□□□□□ -2.01
VHR1YIL056W RAD3P06839 778 aa2.51□□□□□ -2.01
VHR1YIL056W NHP6BP11633 99 aaKnown RBP2.51□□□□□ -2.01
VHR1YIL056W GPI12P23797 304 aa2.51□□□□□ -2.01
VHR1YIL056W RPS5P26783 225 aaKnown RBP2.51□□□□□ -2.01
VHR1YIL056W ADE1P27616 306 aa2.51□□□□□ -2.01
VHR1YIL056W ICL1P28240 557 aaPredicted RBP2.51□□□□□ -2.01
VHR1YIL056W NRP1P32770 719 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
VHR1YIL056W YSC83P32792 385 aa2.51□□□□□ -2.01
VHR1YIL056W SPT10P35208 640 aa2.51□□□□□ -2.01
VHR1YIL056W QDR3P38227 689 aa2.51□□□□□ -2.01
VHR1YIL056W YHR177WP38867 453 aa2.51□□□□□ -2.01
VHR1YIL056W SUR2P38992 349 aa2.51□□□□□ -2.01
VHR1YIL056W OXA1P39952 402 aa2.51□□□□□ -2.01
VHR1YIL056W STE24P47154 453 aa2.51□□□□□ -2.01
VHR1YIL056W DNL4Q08387 944 aaPredicted RBP2.51□□□□□ -2.01
VHR1YIL056W PEX27Q08580 376 aa2.51□□□□□ -2.01
VHR1YIL056W YOR029WQ12243 111 aa2.51□□□□□ -2.01
VHR1YIL056W PRP46Q12417 451 aaPredicted RBP2.51□□□□□ -2.01
VHR1YIL056W RAD9P14737 1309 aa2.5□□□□□ -2.01
VHR1YIL056W TPK3P05986 398 aa2.5□□□□□ -2.01
VHR1YIL056W RHO1P06780 209 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W CDC33P07260 213 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W RPL35AP0CX84 120 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W RPL35BP0CX85 120 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W TCP1P12612 559 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W FRS2P15625 503 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W PPA2P28239 310 aa2.5□□□□□ -2.01
VHR1YIL056W DEP1P31385 405 aa2.5□□□□□ -2.01
VHR1YIL056W RAD5P32849 1169 aaPredicted RBP2.5□□□□□ -2.01
VHR1YIL056W SKG6P32900 734 aaPredicted RBP2.5□□□□□ -2.01
VHR1YIL056W YMR262WP38430 313 aa2.5□□□□□ -2.01
VHR1YIL056W FET3P38993 636 aa2.5□□□□□ -2.01
VHR1YIL056W PAC11P40960 533 aa2.5□□□□□ -2.01
VHR1YIL056W GAB1P41733 394 aa2.5□□□□□ -2.01
VHR1YIL056W HIT1P46973 164 aa2.5□□□□□ -2.01
VHR1YIL056W SPP2Q02521 185 aa2.5□□□□□ -2.01
VHR1YIL056W SHS1Q07657 551 aa2.5□□□□□ -2.01
VHR1YIL056W PAM18Q07914 168 aa2.5□□□□□ -2.01
VHR1YIL056W ABP140Q08641 628 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W AIM45Q12480 344 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W UBA3Q99344 299 aa2.5□□□□□ -2.01
VHR1YIL056W RRT12P25381 491 aa2.5□□□□□ -2.01
VHR1YIL056W PEX3P28795 441 aa2.5□□□□□ -2.01
VHR1YIL056W PHA2P32452 334 aa2.5□□□□□ -2.01
VHR1YIL056W UBC6P33296 250 aaPredicted RBP2.5□□□□□ -2.01
VHR1YIL056W YKL097CP34245 136 aa2.5□□□□□ -2.01
VHR1YIL056W COS9P36034 407 aa2.5□□□□□ -2.01
VHR1YIL056W ERG10P41338 398 aaKnown RBP2.5□□□□□ -2.01
VHR1YIL056W KAP114P53067 1004 aa2.5□□□□□ -2.01
VHR1YIL056W CRH1P53301 507 aa2.5□□□□□ -2.01
VHR1YIL056W DIA1P54005 336 aa2.5□□□□□ -2.01
VHR1YIL056W NSE1Q07913 336 aa2.5□□□□□ -2.01
VHR1YIL056W OPI3P05375 206 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms