RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YJR030CP47101 745 aa3.39□□□□□ -1.87
PDX1YGR193C HXT16P47185 567 aa3.39□□□□□ -1.87
PDX1YGR193C ORC5P50874 479 aa3.39□□□□□ -1.87
PDX1YGR193C ZRG17P53735 605 aa3.39□□□□□ -1.87
PDX1YGR193C YNR071CP53757 342 aa3.39□□□□□ -1.87
PDX1YGR193C ABF2Q02486 183 aa3.39□□□□□ -1.87
PDX1YGR193C SHR3Q02774 210 aa3.39□□□□□ -1.87
PDX1YGR193C UBP16Q02863 499 aa3.39□□□□□ -1.87
PDX1YGR193C MSC1Q03104 513 aa3.39□□□□□ -1.87
PDX1YGR193C SNU56Q03782 492 aaKnown RBP3.39□□□□□ -1.87
PDX1YGR193C ADH6Q04894 360 aaKnown RBP3.39□□□□□ -1.87
PDX1YGR193C SSK1Q07084 712 aa3.39□□□□□ -1.87
PDX1YGR193C COS7Q07788 383 aa3.39□□□□□ -1.87
PDX1YGR193C SRL2Q12020 392 aa3.39□□□□□ -1.87
PDX1YGR193C MLH3Q12083 715 aa3.39□□□□□ -1.87
PDX1YGR193C ATG34Q12292 412 aa3.39□□□□□ -1.87
PDX1YGR193C PRP46Q12417 451 aaPredicted RBP3.39□□□□□ -1.87
PDX1YGR193C ERG27Q12452 347 aaKnown RBP3.39□□□□□ -1.87
PDX1YGR193C PSF1Q12488 208 aa3.39□□□□□ -1.87
PDX1YGR193C GAL80P04387 435 aa3.38□□□□□ -1.87
PDX1YGR193C CDC7P06243 507 aa3.38□□□□□ -1.87
PDX1YGR193C ATP1P07251 545 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C EXG1P23776 448 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C RSA4P25382 515 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C PUT3P25502 979 aaPredicted RBP3.38□□□□□ -1.87
PDX1YGR193C ATG22P25568 528 aa3.38□□□□□ -1.87
PDX1YGR193C SUA7P29055 345 aaPredicted RBP3.38□□□□□ -1.87
PDX1YGR193C HYM1P32464 399 aa3.38□□□□□ -1.87
PDX1YGR193C TMT1P32643 299 aa3.38□□□□□ -1.87
PDX1YGR193C UGP1P32861 499 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C PTC1P35182 281 aa3.38□□□□□ -1.87
PDX1YGR193C TCD2P36101 447 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C YPK3P38070 525 aa3.38□□□□□ -1.87
PDX1YGR193C SPP381P38282 291 aaPredicted RBP3.38□□□□□ -1.87
PDX1YGR193C PRS3P38689 320 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C YHR122WP38829 231 aa3.38□□□□□ -1.87
PDX1YGR193C PAC2P39937 518 aa3.38□□□□□ -1.87
PDX1YGR193C BTT1P40314 149 aaPredicted RBP3.38□□□□□ -1.87
PDX1YGR193C PGD1P40356 397 aa3.38□□□□□ -1.87
PDX1YGR193C LAS21P40367 830 aa3.38□□□□□ -1.87
PDX1YGR193C VHS2P40463 436 aa3.38□□□□□ -1.87
PDX1YGR193C CSM2P40465 213 aa3.38□□□□□ -1.87
PDX1YGR193C MAM33P40513 266 aa3.38□□□□□ -1.87
PDX1YGR193C FMP32P43557 207 aa3.38□□□□□ -1.87
PDX1YGR193C FAR7P43592 221 aa3.38□□□□□ -1.87
PDX1YGR193C YFR057WP43625 151 aa3.38□□□□□ -1.87
PDX1YGR193C TRS85P46944 698 aa3.38□□□□□ -1.87
PDX1YGR193C ZAP1P47043 880 aa3.38□□□□□ -1.87
PDX1YGR193C LYS20P48570 428 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C YIP5P53108 310 aa3.38□□□□□ -1.87
PDX1YGR193C MRM2P53123 320 aa3.38□□□□□ -1.87
PDX1YGR193C TPS1Q00764 495 aaKnown RBP3.38□□□□□ -1.87
PDX1YGR193C YDR541CQ03049 344 aa3.38□□□□□ -1.87
PDX1YGR193C YMR279CQ03263 540 aa3.38□□□□□ -1.87
PDX1YGR193C YML037CQ03703 340 aa3.38□□□□□ -1.87
PDX1YGR193C VHS1Q03785 461 aa3.38□□□□□ -1.87
PDX1YGR193C PEX30Q06169 523 aa3.38□□□□□ -1.87
PDX1YGR193C IPK1Q06667 281 aa3.38□□□□□ -1.87
PDX1YGR193C MRPL35Q06678 367 aa3.38□□□□□ -1.87
PDX1YGR193C HRD1Q08109 551 aa3.38□□□□□ -1.87
PDX1YGR193C SGT1Q08446 395 aa3.38□□□□□ -1.87
PDX1YGR193C UIP4Q08926 304 aa3.38□□□□□ -1.87
PDX1YGR193C YLR046CQ12253 270 aa3.38□□□□□ -1.87
PDX1YGR193C RRI1Q12468 440 aa3.38□□□□□ -1.87
PDX1YGR193C SLO1Q3E784 85 aa3.38□□□□□ -1.87
PDX1YGR193C YDR157WA0A023PZE8 133 aa3.37□□□□□ -1.87
PDX1YGR193C CAR1P00812 333 aaKnown RBP3.37□□□□□ -1.87
PDX1YGR193C RPP0P05317 312 aaKnown RBP3.37□□□□□ -1.87
PDX1YGR193C YPK1P12688 680 aaKnown RBP3.37□□□□□ -1.87
PDX1YGR193C PCT1P13259 424 aa3.37□□□□□ -1.87
PDX1YGR193C RPS1BP23248 255 aaKnown RBP3.37□□□□□ -1.87
PDX1YGR193C FEN2P25621 512 aaKnown RBP3.37□□□□□ -1.87
PDX1YGR193C YIH1P25637 258 aa3.37□□□□□ -1.87
PDX1YGR193C MSS51P32335 436 aa3.37□□□□□ -1.87
PDX1YGR193C PET127P32606 800 aa3.37□□□□□ -1.87
PDX1YGR193C EMP70P32802 667 aa3.37□□□□□ -1.87
PDX1YGR193C REC114P32841 428 aa3.37□□□□□ -1.87
PDX1YGR193C YKR075CP36155 307 aa3.37□□□□□ -1.87
PDX1YGR193C MRPL15P36523 253 aa3.37□□□□□ -1.87
PDX1YGR193C KTR3P38130 404 aaPredicted RBP3.37□□□□□ -1.87
PDX1YGR193C RRN10P38204 145 aa3.37□□□□□ -1.87
PDX1YGR193C RFS1P38234 210 aaKnown RBP3.37□□□□□ -1.87
PDX1YGR193C YBR220CP38318 560 aa3.37□□□□□ -1.87
PDX1YGR193C VHC1P38329 1120 aa3.37□□□□□ -1.87
PDX1YGR193C COS8P38723 381 aa3.37□□□□□ -1.87
PDX1YGR193C GPI16P38875 610 aa3.37□□□□□ -1.87
PDX1YGR193C UIP3P39547 235 aa3.37□□□□□ -1.87
PDX1YGR193C PAC11P40960 533 aa3.37□□□□□ -1.87
PDX1YGR193C IDP2P41939 412 aa3.37□□□□□ -1.87
PDX1YGR193C SPG5P42933 373 aa3.37□□□□□ -1.87
PDX1YGR193C YAE1P47118 141 aaPredicted RBP3.37□□□□□ -1.87
PDX1YGR193C YPT32P51996 222 aaKnown RBP3.37□□□□□ -1.87
PDX1YGR193C JAC1P53193 184 aa3.37□□□□□ -1.87
PDX1YGR193C STD1Q02794 444 aa3.37□□□□□ -1.87
PDX1YGR193C OST6Q03723 332 aa3.37□□□□□ -1.87
PDX1YGR193C PRM6Q04705 352 aa3.37□□□□□ -1.87
PDX1YGR193C YMR253CQ04835 414 aa3.37□□□□□ -1.87
PDX1YGR193C YMR310CQ04867 317 aaPredicted RBP3.37□□□□□ -1.87
PDX1YGR193C FMP42Q04991 504 aa3.37□□□□□ -1.87
PDX1YGR193C ASM4Q05166 528 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms