RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C MRI1Q06489 411 aaKnown RBP3.29□□□□□ -1.88
SPT4YGR063C ERF2Q06551 359 aa3.29□□□□□ -1.88
SPT4YGR063C MRPL35Q06678 367 aa3.29□□□□□ -1.88
SPT4YGR063C THI13Q07748 340 aa3.29□□□□□ -1.88
SPT4YGR063C HOS1Q12214 470 aa3.29□□□□□ -1.88
SPT4YGR063C INP53Q12271 1107 aa3.29□□□□□ -1.88
SPT4YGR063C MDY2Q12285 212 aa3.29□□□□□ -1.88
SPT4YGR063C NDJ1Q12366 352 aa3.29□□□□□ -1.88
SPT4YGR063C MHT1Q12525 324 aa3.29□□□□□ -1.88
SPT4YGR063C CDC4P07834 779 aa3.28□□□□□ -1.88
SPT4YGR063C PUT1P09368 476 aa3.28□□□□□ -1.88
SPT4YGR063C TFS1P14306 219 aa3.28□□□□□ -1.88
SPT4YGR063C CDC34P14682 295 aa3.28□□□□□ -1.88
SPT4YGR063C RPB3P16370 318 aaKnown RBP3.28□□□□□ -1.88
SPT4YGR063C PDX1P16451 410 aa3.28□□□□□ -1.88
SPT4YGR063C PRP2P20095 876 aaPredicted RBP3.28□□□□□ -1.88
SPT4YGR063C STE50P25344 346 aa3.28□□□□□ -1.88
SPT4YGR063C PET18P25362 215 aa3.28□□□□□ -1.88
SPT4YGR063C IMG1P25626 169 aa3.28□□□□□ -1.88
SPT4YGR063C YCR090CP25654 182 aaKnown RBP3.28□□□□□ -1.88
SPT4YGR063C YCR099CP25657 155 aa3.28□□□□□ -1.88
SPT4YGR063C SUA7P29055 345 aaPredicted RBP3.28□□□□□ -1.88
SPT4YGR063C CDC5P32562 705 aa3.28□□□□□ -1.88
SPT4YGR063C YEF1P32622 495 aa3.28□□□□□ -1.88
SPT4YGR063C YSC83P32792 385 aa3.28□□□□□ -1.88
SPT4YGR063C TRS65P32893 560 aa3.28□□□□□ -1.88
SPT4YGR063C MSN2P33748 704 aa3.28□□□□□ -1.88
SPT4YGR063C TGL1P34163 548 aa3.28□□□□□ -1.88
SPT4YGR063C PIN4P34217 668 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SPT4YGR063C SCD5P34758 872 aa3.28□□□□□ -1.88
SPT4YGR063C YKL075CP36083 450 aa3.28□□□□□ -1.88
SPT4YGR063C YKL069WP36088 180 aa3.28□□□□□ -1.88
SPT4YGR063C TVP38P36164 337 aa3.28□□□□□ -1.88
SPT4YGR063C MRPL28P36527 147 aa3.28□□□□□ -1.88
SPT4YGR063C DBP8P38719 431 aa3.28□□□□□ -1.88
SPT4YGR063C MUP3P38734 546 aa3.28□□□□□ -1.88
SPT4YGR063C PHO90P39535 881 aa3.28□□□□□ -1.88
SPT4YGR063C PRP39P39682 629 aaKnown RBP3.28□□□□□ -1.88
SPT4YGR063C VPS52P39904 641 aa3.28□□□□□ -1.88
SPT4YGR063C FAU1P40099 211 aa3.28□□□□□ -1.88
SPT4YGR063C GAT2P40209 560 aa3.28□□□□□ -1.88
SPT4YGR063C PAU15P40585 124 aa3.28□□□□□ -1.88
SPT4YGR063C SNM1P40993 198 aa3.28□□□□□ -1.88
SPT4YGR063C HXT14P42833 540 aa3.28□□□□□ -1.88
SPT4YGR063C LOC1P43586 204 aaPredicted RBP3.28□□□□□ -1.88
SPT4YGR063C LSB3P43603 459 aaKnown RBP3.28□□□□□ -1.88
SPT4YGR063C ALY2P47029 1046 aa3.28□□□□□ -1.88
SPT4YGR063C TAX4P47030 604 aa3.28□□□□□ -1.88
SPT4YGR063C TAD2P47058 250 aa3.28□□□□□ -1.88
SPT4YGR063C YGR151CP53287 111 aa3.28□□□□□ -1.88
SPT4YGR063C FMP41P53889 259 aaKnown RBP3.28□□□□□ -1.88
SPT4YGR063C ARG5,6Q01217 863 aa3.28□□□□□ -1.88
SPT4YGR063C SNO1Q03144 224 aa3.28□□□□□ -1.88
SPT4YGR063C PLB2Q03674 706 aa3.28□□□□□ -1.88
SPT4YGR063C AIM32Q04689 311 aa3.28□□□□□ -1.88
SPT4YGR063C PIN3Q06449 215 aa3.28□□□□□ -1.88
SPT4YGR063C MFG1Q07684 458 aa3.28□□□□□ -1.88
SPT4YGR063C LDB18Q07887 179 aa3.28□□□□□ -1.88
SPT4YGR063C THP1Q08231 455 aa3.28□□□□□ -1.88
SPT4YGR063C YOR365CQ08844 703 aa3.28□□□□□ -1.88
SPT4YGR063C RAD28Q12021 506 aa3.28□□□□□ -1.88
SPT4YGR063C SRO7Q12038 1033 aa3.28□□□□□ -1.88
SPT4YGR063C SIA1Q12212 622 aa3.28□□□□□ -1.88
SPT4YGR063C TMA17Q12513 150 aa3.28□□□□□ -1.88
SPT4YGR063C TMA7Q3E764 64 aaKnown RBP3.28□□□□□ -1.88
SPT4YGR063C HRP1Q99383 534 aaKnown RBP3.28□□□□□ -1.88
SPT4YGR063C UBR2Q07963 1872 aa3.28□□□□□ -1.88
SPT4YGR063C RPS9AO13516 197 aaKnown RBP3.27□□□□□ -1.89
SPT4YGR063C QCR7P00128 127 aa3.27□□□□□ -1.89
SPT4YGR063C ADH3P07246 375 aaKnown RBP3.27□□□□□ -1.89
SPT4YGR063C CBP1P07252 654 aa3.27□□□□□ -1.89
SPT4YGR063C DFR1P07807 211 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SPT4YGR063C DDI2P0CH63 225 aa3.27□□□□□ -1.89
SPT4YGR063C DDI3P0CH64 225 aa3.27□□□□□ -1.89
SPT4YGR063C SAM35P14693 329 aa3.27□□□□□ -1.89
SPT4YGR063C CPR1P14832 162 aaKnown RBP3.27□□□□□ -1.89
SPT4YGR063C ERD2P18414 219 aa3.27□□□□□ -1.89
SPT4YGR063C CDC42P19073 191 aa3.27□□□□□ -1.89
SPT4YGR063C HOP1P20050 605 aa3.27□□□□□ -1.89
SPT4YGR063C NAR1P23503 491 aaKnown RBP3.27□□□□□ -1.89
SPT4YGR063C YCP4P25349 247 aaKnown RBP3.27□□□□□ -1.89
SPT4YGR063C RRP7P25368 297 aaPredicted RBP3.27□□□□□ -1.89
SPT4YGR063C GID7P25569 745 aa3.27□□□□□ -1.89
SPT4YGR063C PBN1P25580 416 aa3.27□□□□□ -1.89
SPT4YGR063C YCR015CP25616 317 aa3.27□□□□□ -1.89
SPT4YGR063C LIP5P32875 414 aa3.27□□□□□ -1.89
SPT4YGR063C SNC2P33328 115 aa3.27□□□□□ -1.89
SPT4YGR063C TMA19P35691 167 aaKnown RBP3.27□□□□□ -1.89
SPT4YGR063C SFK1P35735 353 aa3.27□□□□□ -1.89
SPT4YGR063C PHO11P35842 467 aa3.27□□□□□ -1.89
SPT4YGR063C YKL151CP36059 337 aa3.27□□□□□ -1.89
SPT4YGR063C YBR053CP38235 358 aa3.27□□□□□ -1.89
SPT4YGR063C RTC2P38279 296 aa3.27□□□□□ -1.89
SPT4YGR063C TSL1P38427 1098 aaKnown RBP3.27□□□□□ -1.89
SPT4YGR063C PHO12P38693 467 aa3.27□□□□□ -1.89
SPT4YGR063C YHR035WP38769 630 aa3.27□□□□□ -1.89
SPT4YGR063C PEX28P38848 579 aa3.27□□□□□ -1.89
SPT4YGR063C PFS1P38872 237 aa3.27□□□□□ -1.89
SPT4YGR063C MNL1P38888 796 aa3.27□□□□□ -1.89
SPT4YGR063C SKN7P38889 622 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms