RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	RPL15A	P05748	204 aa	Known RBP	2.84	□□□□□ -1.95
YGR039W	YGR039W	CDC36	P06100	191 aa	Predicted RBP	2.84	□□□□□ -1.95
YGR039W	YGR039W	RAD3	P06839	778 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	MATALPHA1	P0CY06	175 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	HMLALPHA1	P0CY07	175 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	CHA1	P25379	360 aa	Known RBP	2.84	□□□□□ -1.95
YGR039W	YGR039W	RAD51	P25454	400 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	TRS65	P32893	560 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	YKL071W	P36086	256 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	PRS4	P38063	326 aa	Predicted RBP	2.84	□□□□□ -1.95
YGR039W	YGR039W	KRE9	P39005	276 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	YJR030C	P47101	745 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	TRM112	P53738	135 aa	Predicted RBP	2.84	□□□□□ -1.95
YGR039W	YGR039W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.84	□□□□□ -1.95	not detected
YGR039W	YGR039W	YMR027W	Q04371	470 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	GTO3	Q04806	366 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	ADH6	Q04894	360 aa	Known RBP	2.84	□□□□□ -1.95
YGR039W	YGR039W	SSQ1	Q05931	657 aa	Predicted RBP	2.84	□□□□□ -1.95
YGR039W	YGR039W	PAM18	Q07914	168 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	YLR012C	Q07927	99 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	TLG2	Q08144	397 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	PPT2	Q12036	173 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	RPN6	Q12377	434 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	YBL111C	Q3E7Y5	667 aa		2.84	□□□□□ -1.95
YGR039W	YGR039W	CYC3	P06182	269 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	RPL31A	P0C2H8	113 aa	Known RBP	2.83	□□□□□ -1.96
YGR039W	YGR039W	RPL20A	P0CX23	172 aa	Known RBP	2.83	□□□□□ -1.96
YGR039W	YGR039W	RPL20B	P0CX24	172 aa	Predicted RBP	2.83	□□□□□ -1.96
YGR039W	YGR039W	MTF1	P14908	341 aa	Known RBP	2.83	□□□□□ -1.96
YGR039W	YGR039W	RPO26	P20435	155 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	MUD1	P32605	298 aa	Known RBP	2.83	□□□□□ -1.96
YGR039W	YGR039W	SPO23	P33757	523 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	RPC37	P36121	282 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	AIM29	P36154	155 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	LDB7	P38210	180 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	RCK2	P38623	610 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	YHR035W	P38769	630 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	MTC6	P38849	526 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	COX14	P39103	70 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	GDS1	P41913	522 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	MRM2	P53123	320 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	CGR1	P53188	120 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	IBD2	P53892	351 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	GIM3	P53900	129 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	IRC4	Q03036	179 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	TDA1	Q03533	586 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	ENT5	Q03769	411 aa	Known RBP	2.83	□□□□□ -1.96
YGR039W	YGR039W	MSH5	Q12175	901 aa		2.83	□□□□□ -1.96
YGR039W	YGR039W	REP1	P03871	373 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	VPS1	P21576	704 aa	Known RBP	2.82	□□□□□ -1.96
YGR039W	YGR039W	DAL82	P21705	255 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	PRR1	P28708	518 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	MEI5	P32489	222 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	KAR9	P32526	644 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	MGM101	P32787	269 aa	Known RBP	2.82	□□□□□ -1.96
YGR039W	YGR039W	ZRT1	P32804	376 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	AVT5	P38176	459 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	YBP1	P38315	674 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	NPT1	P39683	429 aa	Known RBP	2.82	□□□□□ -1.96
YGR039W	YGR039W	WWM1	P43582	211 aa	Known RBP	2.82	□□□□□ -1.96
YGR039W	YGR039W	CIN2	P46670	268 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	CDC14	Q00684	551 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	YPL077C	Q02831	240 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	OST6	Q03723	332 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	VBA1	Q04301	562 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	DIB1	Q06819	143 aa	Predicted RBP	2.82	□□□□□ -1.96
YGR039W	YGR039W	ERP3	Q12403	225 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	YOS9	Q99220	542 aa		2.82	□□□□□ -1.96
YGR039W	YGR039W	RHO1	P06780	209 aa	Known RBP	2.81	□□□□□ -1.96
YGR039W	YGR039W	ITR2	P30606	609 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	FUN26	P31381	517 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	AGA1	P32323	725 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	NUP2	P32499	720 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	RAD5	P32849	1169 aa	Predicted RBP	2.81	□□□□□ -1.96
YGR039W	YGR039W	PDC2	P32896	925 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	MRPL6	P32904	214 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	NAT2	P37293	288 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	YER034W	P40022	185 aa	Known RBP	2.81	□□□□□ -1.96
YGR039W	YGR039W	UBC13	P52490	153 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	COS10	P52924	374 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	MST27	P53176	234 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	GOR1	P53839	350 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	ALG11	P53954	548 aa	Known RBP	2.81	□□□□□ -1.96
YGR039W	YGR039W	SNZ1	Q03148	297 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	TRM82	Q03774	444 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	SNX41	Q04053	625 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	PRM6	Q04705	352 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	ASR1	Q06834	288 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	RDL2	Q08742	149 aa	Known RBP	2.81	□□□□□ -1.96
YGR039W	YGR039W	DDC1	Q08949	612 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	FRE8	Q12209	686 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	EAF3	Q12432	401 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	PCL9	Q12477	304 aa		2.81	□□□□□ -1.96
YGR039W	YGR039W	TRP1	P00912	224 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	DAL81	P21657	970 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	PBN1	P25580	416 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	SRB4	P32569	687 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	MCH2	P36032	473 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	YPC1	P38298	316 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	RTC3	P38804	111 aa	Predicted RBP	2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms