RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	RRP7	P25368	297 aa	Predicted RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	AAR2	P32357	355 aa	Predicted RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	CDC12	P32468	407 aa	Known RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	VPH1	P32563	840 aa	Known RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	PHO88	P38264	188 aa	Predicted RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	BMT2	P38278	337 aa		5.11	□□□□□ -1.59
VTC2	YFL004W	VMA21	P41806	77 aa		5.11	□□□□□ -1.59
VTC2	YFL004W	PFS2	P42841	465 aa	Known RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	RPN11	P43588	306 aa	Known RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	YGL185C	P53100	379 aa		5.11	□□□□□ -1.59
VTC2	YFL004W	SAY1	P53324	424 aa		5.11	□□□□□ -1.59
VTC2	YFL004W	FMP41	P53889	259 aa	Known RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	GRC3	Q07845	632 aa		5.11	□□□□□ -1.59
VTC2	YFL004W	YTM1	Q12024	460 aa	Predicted RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	YPR027C	Q12079	277 aa		5.11	□□□□□ -1.59
VTC2	YFL004W	MRH1	Q12117	320 aa	Predicted RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	TY1A-NL1	Q12391	440 aa	Known RBP	5.11	□□□□□ -1.59
VTC2	YFL004W	YPR014C	Q6B0W2	109 aa		5.11	□□□□□ -1.59
VTC2	YFL004W	AI1	P03875	834 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	ADE8	P04161	214 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	DED1	P06634	604 aa	Known RBP	5.1	□□□□□ -1.59
VTC2	YFL004W	RER1	P25560	188 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	YCR099C	P25657	155 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	PRE4	P30657	266 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	APE3	P37302	537 aa	Known RBP	5.1	□□□□□ -1.59
VTC2	YFL004W	MEP2	P41948	499 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	SLS1	P42900	643 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	VPS73	P53142	486 aa	Known RBP	5.1	□□□□□ -1.59
VTC2	YFL004W	BUD17	P53727	317 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	DUS1	P53759	423 aa	Known RBP	5.1	□□□□□ -1.59
VTC2	YFL004W	TPS1	Q00764	495 aa	Known RBP	5.1	□□□□□ -1.59
VTC2	YFL004W	HAS1	Q03532	505 aa	Known RBP	5.1	□□□□□ -1.59
VTC2	YFL004W	YLR346C	Q06139	101 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	MED7	Q08278	222 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	BDS1	Q08347	646 aa		5.1	□□□□□ -1.59
VTC2	YFL004W	PHO5	P00635	467 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	ATP4	P05626	244 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	MATALPHA1	P0CY06	175 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	HMLALPHA1	P0CY07	175 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	APE1	P14904	514 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	MTF1	P14908	341 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	PET9	P18239	318 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	FUN14	P18411	198 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	BUD5	P25300	642 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	YIH1	P25637	258 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	PRE3	P38624	215 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	ARP1	P38696	384 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	YHR054C	P38780	354 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	NPR2	P39923	615 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	YEL028W	P39989	153 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	FMC1	P40491	155 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	PAC10	P48363	199 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	PUS4	P48567	403 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	SAM37	P50110	327 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	SYF2	P53277	215 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	YNR065C	P53751	1116 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	MET14	Q02196	202 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	MRI1	Q06489	411 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	ACK1	Q07622	623 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	SDO1	Q07953	250 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	REX3	Q12090	404 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	UPC2	Q12151	913 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	MRX4	Q12467	430 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	RRI1	Q12468	440 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	TMA7	Q3E764	64 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	RPL4A	P10664	362 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	MET8	P15807	274 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	SEC59	P20048	519 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	SEC22	P22214	214 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	PRE7	P23724	241 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	SFA1	P32771	386 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	TVP38	P36164	337 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	VID24	P38263	362 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	AIM3	P38266	947 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	RAD55	P38953	406 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	ASP1	P38986	381 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	VAB2	P40003	282 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	RPS10B	P46784	105 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	DPB11	P47027	764 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	YJR111C	P47148	283 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	RPL4B	P49626	362 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	SUT1	P53032	299 aa	Known RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	GPI15	P53961	229 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	CDC14	Q00684	551 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	SPP2	Q02521	185 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	CWC27	Q02770	301 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	OST6	Q03723	332 aa		5.09	□□□□□ -1.59
VTC2	YFL004W	ISA1	Q07821	250 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	RPS10A	Q08745	105 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	TIR4	Q12218	487 aa	Predicted RBP	5.09	□□□□□ -1.59
VTC2	YFL004W	MET3	P08536	511 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	MIR1	P23641	311 aa	Known RBP	5.08	□□□□□ -1.6
VTC2	YFL004W	DEG1	P31115	442 aa	Known RBP	5.08	□□□□□ -1.6
VTC2	YFL004W	SFK1	P35735	353 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	COS9	P36034	407 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
VTC2	YFL004W	FLR1	P38124	548 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	IME4	P41833	600 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	PEX31	P53203	462 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	YGR012W	P53206	393 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms