RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W RIF1P29539 1916 aa5.5□□□□□ -1.53
LCP5YER127W FRS2P15625 503 aaKnown RBP5.5□□□□□ -1.53
LCP5YER127W EFB1P32471 206 aaKnown RBP5.5□□□□□ -1.53
LCP5YER127W COT1P32798 439 aa5.5□□□□□ -1.53
LCP5YER127W MRX3P38172 270 aa5.5□□□□□ -1.53
LCP5YER127W FYV8P46949 817 aaKnown RBP5.5□□□□□ -1.53
LCP5YER127W PDR16P53860 351 aaKnown RBP5.5□□□□□ -1.53
LCP5YER127W YPR078CQ06813 372 aa5.5□□□□□ -1.53
LCP5YER127W GAT3Q07928 141 aa5.5□□□□□ -1.53
LCP5YER127W PCL9Q12477 304 aa5.5□□□□□ -1.53
LCP5YER127W TOR2P32600 2474 aaKnown RBP5.5□□□□□ -1.53
LCP5YER127W ISY1P21374 235 aaPredicted RBP5.49□□□□□ -1.53
LCP5YER127W NAS2P40555 220 aa5.49□□□□□ -1.53
LCP5YER127W CLD1P53264 445 aa5.49□□□□□ -1.53
LCP5YER127W FUS2Q05670 677 aa5.49□□□□□ -1.53
LCP5YER127W PLP2Q12017 286 aa5.49□□□□□ -1.53
LCP5YER127W RBD2Q12270 262 aa5.49□□□□□ -1.53
LCP5YER127W HAP2P06774 265 aa5.48□□□□□ -1.53
LCP5YER127W RNR2P09938 399 aaKnown RBP5.48□□□□□ -1.53
LCP5YER127W CKA2P19454 339 aa5.48□□□□□ -1.53
LCP5YER127W RSA4P25382 515 aaKnown RBP5.48□□□□□ -1.53
LCP5YER127W PRR1P28708 518 aa5.48□□□□□ -1.53
LCP5YER127W HMX1P32339 317 aa5.48□□□□□ -1.53
LCP5YER127W RTC2P38279 296 aa5.48□□□□□ -1.53
LCP5YER127W SEC9P40357 651 aa5.48□□□□□ -1.53
LCP5YER127W BNS1P50084 137 aa5.48□□□□□ -1.53
LCP5YER127W HST1P53685 503 aa5.48□□□□□ -1.53
LCP5YER127W YMR010WQ03687 405 aa5.48□□□□□ -1.53
LCP5YER127W ARR1Q06596 294 aa5.48□□□□□ -1.53
LCP5YER127W DNL4Q08387 944 aaPredicted RBP5.48□□□□□ -1.53
LCP5YER127W NAG1Q8TGN9 163 aa5.48□□□□□ -1.53
LCP5YER127W REV1P12689 985 aa5.47□□□□□ -1.53
LCP5YER127W KRR1P25586 316 aaPredicted RBP5.47□□□□□ -1.53
LCP5YER127W YOX1P34161 385 aa5.47□□□□□ -1.53
LCP5YER127W MIG3P39943 394 aa5.47□□□□□ -1.53
LCP5YER127W SDT1P53078 280 aa5.47□□□□□ -1.53
LCP5YER127W PGA2P53903 129 aa5.47□□□□□ -1.53
LCP5YER127W CMS1Q07897 291 aaKnown RBP5.47□□□□□ -1.53
LCP5YER127W IES4Q08561 116 aa5.47□□□□□ -1.53
LCP5YER127W STF1P01098 86 aa5.46□□□□□ -1.54
LCP5YER127W SSE1P32589 693 aaKnown RBP5.46□□□□□ -1.54
LCP5YER127W POP2P39008 433 aa5.46□□□□□ -1.54
LCP5YER127W OXA1P39952 402 aa5.46□□□□□ -1.54
LCP5YER127W SMP3Q04174 516 aa5.46□□□□□ -1.54
LCP5YER127W YDL114WQ07530 308 aa5.46□□□□□ -1.54
LCP5YER127W YOL075CQ08234 1294 aa5.46□□□□□ -1.54
LCP5YER127W TMC1Q08422 150 aaPredicted RBP5.46□□□□□ -1.54
LCP5YER127W YDL199CQ12407 687 aa5.46□□□□□ -1.54
LCP5YER127W SPO23P33757 523 aa5.45□□□□□ -1.54
LCP5YER127W SIP3P38717 1229 aa5.45□□□□□ -1.54
LCP5YER127W YNL146WP53906 100 aa5.45□□□□□ -1.54
LCP5YER127W ALG11P53954 548 aaKnown RBP5.45□□□□□ -1.54
LCP5YER127W CWC21Q03375 135 aaKnown RBP5.45□□□□□ -1.54
LCP5YER127W RRB1Q04225 511 aaKnown RBP5.45□□□□□ -1.54
LCP5YER127W YMR027WQ04371 470 aa5.45□□□□□ -1.54
LCP5YER127W LIP2Q06005 328 aa5.45□□□□□ -1.54
LCP5YER127W CUR1Q06469 252 aa5.45□□□□□ -1.54
LCP5YER127W MFG1Q07684 458 aa5.45□□□□□ -1.54
LCP5YER127W AIM45Q12480 344 aaKnown RBP5.45□□□□□ -1.54
LCP5YER127W AAT2P23542 418 aaKnown RBP5.44□□□□□ -1.54
LCP5YER127W VPS3P23643 1011 aa5.44□□□□□ -1.54
LCP5YER127W HXT1P32465 570 aa5.44□□□□□ -1.54
LCP5YER127W HMT1P38074 348 aa5.44□□□□□ -1.54
LCP5YER127W LCP5P40079 357 aaPredicted RBP5.44□□□□□ -1.54
LCP5YER127W PRE5P40302 234 aaKnown RBP5.44□□□□□ -1.54
LCP5YER127W ATG18P43601 500 aa5.44□□□□□ -1.54
LCP5YER127W REX2P54964 269 aaKnown RBP5.44□□□□□ -1.54
LCP5YER127W RPS16AP0CX51 143 aaKnown RBP5.43□□□□□ -1.54
LCP5YER127W RPS16BP0CX52 143 aaKnown RBP5.43□□□□□ -1.54
LCP5YER127W CKI1P20485 582 aa5.43□□□□□ -1.54
LCP5YER127W HXT2P23585 541 aa5.43□□□□□ -1.54
LCP5YER127W FUN26P31381 517 aa5.43□□□□□ -1.54
LCP5YER127W NUP2P32499 720 aa5.43□□□□□ -1.54
LCP5YER127W VAM7P32912 316 aa5.43□□□□□ -1.54
LCP5YER127W YHR182WP38870 785 aa5.43□□□□□ -1.54
LCP5YER127W PTI1P39927 425 aaPredicted RBP5.43□□□□□ -1.54
LCP5YER127W UTP18P40362 594 aaPredicted RBP5.43□□□□□ -1.54
LCP5YER127W SHE4P51534 789 aa5.43□□□□□ -1.54
LCP5YER127W SHY1P53266 389 aa5.43□□□□□ -1.54
LCP5YER127W TAF10Q12030 206 aa5.43□□□□□ -1.54
LCP5YER127W DET1Q99288 334 aaKnown RBP5.43□□□□□ -1.54
LCP5YER127W TOR1P35169 2470 aa5.42□□□□□ -1.54
LCP5YER127W VPS1P21576 704 aaKnown RBP5.42□□□□□ -1.54
LCP5YER127W GRR1P24814 1151 aa5.42□□□□□ -1.54
LCP5YER127W LDB16P25587 256 aa5.42□□□□□ -1.54
LCP5YER127W ANR2P36090 516 aaPredicted RBP5.42□□□□□ -1.54
LCP5YER127W ALP1P38971 573 aa5.42□□□□□ -1.54
LCP5YER127W YER186CP40101 306 aa5.42□□□□□ -1.54
LCP5YER127W GAB1P41733 394 aa5.42□□□□□ -1.54
LCP5YER127W NOP13P53883 403 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
LCP5YER127W YET2Q04210 160 aa5.42□□□□□ -1.54
LCP5YER127W SGT2Q12118 346 aaKnown RBP5.42□□□□□ -1.54
LCP5YER127W FAB1P34756 2278 aa5.42□□□□□ -1.54
LCP5YER127W RPS18AP0CX55 146 aaKnown RBP5.41□□□□□ -1.54
LCP5YER127W RPS18BP0CX56 146 aaPredicted RBP5.41□□□□□ -1.54
LCP5YER127W CSE1P33307 960 aa5.41□□□□□ -1.54
LCP5YER127W KDX1P36005 433 aa5.41□□□□□ -1.54
LCP5YER127W SHE3P38272 425 aaKnown RBP5.41□□□□□ -1.54
LCP5YER127W BAT1P38891 393 aaKnown RBP5.41□□□□□ -1.54
LCP5YER127W CIN2P46670 268 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms