RNA–Protein interactions for RNA: YDR244W

PEX5, Transcript of Peroxisomal membrane signal receptor for peroxisomal matrix proteins, yeast

Gene PEX5, Length 1,839 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX5	YDR244W	YGL260W	P53056	76 aa		2.63	□□□□□ -1.99
PEX5	YDR244W	SED5	Q01590	340 aa		2.63	□□□□□ -1.99
PEX5	YDR244W	YLR173W	Q06247	608 aa		2.63	□□□□□ -1.99
PEX5	YDR244W	CMS1	Q07897	291 aa	Known RBP	2.63	□□□□□ -1.99
PEX5	YDR244W	RLP24	Q07915	199 aa	Known RBP	2.63	□□□□□ -1.99
PEX5	YDR244W	JID1	Q12350	301 aa		2.63	□□□□□ -1.99
PEX5	YDR244W	RPN6	Q12377	434 aa		2.63	□□□□□ -1.99
PEX5	YDR244W	YSR3	P23501	404 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	MIR1	P23641	311 aa	Known RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	RVS161	P25343	265 aa	Known RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	ARO2	P28777	376 aa	Known RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	GCG1	P32656	232 aa	Known RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	SKG6	P32900	734 aa	Predicted RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	RFS1	P38234	210 aa	Known RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	RCK2	P38623	610 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	SLM1	P40485	686 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	REE1	P40893	198 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	COX20	Q04935	205 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	YHC1	Q05900	231 aa	Known RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	YLR012C	Q07927	99 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	IRC25	Q07951	179 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	TY3A-G	Q12173	290 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	IZH2	Q12442	317 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	TY3A-I	Q99219	290 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	IZH4	Q99393	312 aa		2.62	□□□□□ -1.99
PEX5	YDR244W	TCB3	Q03640	1545 aa	Known RBP	2.62	□□□□□ -1.99
PEX5	YDR244W	RPS14A	P06367	137 aa	Known RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	NAM9	P27929	486 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	LSM12	P38828	187 aa	Known RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	TDA11	P38854	504 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	RPS14B	P39516	138 aa	Known RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	YGR210C	P42942	411 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	PMT4	P46971	762 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	BNS1	P50084	137 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	YNL134C	P53912	376 aa	Known RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	RDL2	Q08742	149 aa	Known RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	MED4	Q12343	284 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	YMR230W-A	Q3E7B5	62 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	NAG1	Q8TGN9	163 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	SAL1	D6W196	494 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
PEX5	YDR244W	REP1	P03871	373 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	SPS100	P13130	326 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	CTA1	P15202	515 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	PMT2	P31382	759 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	IMP3	P32899	183 aa	Predicted RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	ANR2	P36090	516 aa	Predicted RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	HEM14	P40012	539 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	MOB2	P43563	287 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	ATG18	P43601	500 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	YJL118W	P47022	219 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	KAP114	P53067	1004 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	CRH1	P53301	507 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	SUR7	P54003	302 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	SNX41	Q04053	625 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	FSH2	Q05015	223 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	GAS2	Q06135	555 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	ARV1	Q06541	321 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	GPN3	Q06543	272 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	FDH1	Q08911	376 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	BTS1	Q12051	335 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	ATP16	Q12165	160 aa		2.61	□□□□□ -1.99
PEX5	YDR244W	UTP23	Q12339	254 aa	Known RBP	2.61	□□□□□ -1.99
PEX5	YDR244W	ATP6	P00854	259 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	LDS1	P31379	325 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	KTI12	P34253	313 aa	Known RBP	2.6	□□□□□ -1.99
PEX5	YDR244W	COS9	P36034	407 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	AIM23	P47015	356 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	GMC2	Q06201	188 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	ASR1	Q06834	288 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	POM33	Q12164	279 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	RUD3	Q12234	484 aa	Known RBP	2.6	□□□□□ -1.99
PEX5	YDR244W	SFM1	Q12314	213 aa		2.6	□□□□□ -1.99
PEX5	YDR244W	RPL31A	P0C2H8	113 aa	Known RBP	2.59	□□□□□ -1.99
PEX5	YDR244W	HPR1	P17629	752 aa	Known RBP	2.59	□□□□□ -1.99
PEX5	YDR244W	GIT1	P25346	518 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	RPL16B	P26785	198 aa	Known RBP	2.59	□□□□□ -1.99
PEX5	YDR244W	PRR1	P28708	518 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	NUP2	P32499	720 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	PDC2	P32896	925 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	TAE1	P38340	232 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	YHR045W	P38775	560 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	AIM10	P39965	576 aa	Known RBP	2.59	□□□□□ -1.99
PEX5	YDR244W	YER186C	P40101	306 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	YIA6	P40556	373 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	BNA6	P43619	295 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	SWC4	P53201	476 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	BOR1	P53838	576 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	VAC7	P53950	1165 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	YPL077C	Q02831	240 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	GRX3	Q03835	250 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	CTS2	Q06350	511 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	TAF10	Q12030	206 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	MCT1	Q12283	360 aa		2.59	□□□□□ -1.99
PEX5	YDR244W	TY1B-DR4	Q07793	1604 aa		2.59	□□□□□ -2
PEX5	YDR244W	ADH2	P00331	348 aa	Known RBP	2.58	□□□□□ -2
PEX5	YDR244W	ILV1	P00927	576 aa	Known RBP	2.58	□□□□□ -2
PEX5	YDR244W	CBS2	P14905	389 aa		2.58	□□□□□ -2
PEX5	YDR244W	ERD1	P16151	362 aa		2.58	□□□□□ -2
PEX5	YDR244W	CPR3	P25719	182 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms