RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C FMT1P32785 401 aa2.66□□□□□ -1.98
RUB1YDR139C DBP7P36120 742 aaKnown RBP2.66□□□□□ -1.98
RUB1YDR139C MMS21P38632 267 aa2.66□□□□□ -1.98
RUB1YDR139C FRT2P39734 528 aa2.66□□□□□ -1.98
RUB1YDR139C BTT1P40314 149 aaPredicted RBP2.66□□□□□ -1.98
RUB1YDR139C NAS6P50086 228 aa2.66□□□□□ -1.98
RUB1YDR139C HCH1P53834 153 aa2.66□□□□□ -1.98
RUB1YDR139C MRX8Q05473 314 aa2.66□□□□□ -1.98
RUB1YDR139C SLF1Q12034 447 aaKnown RBP2.66□□□□□ -1.98
RUB1YDR139C RBK1P25332 333 aa2.65□□□□□ -1.99
RUB1YDR139C TAE1P38340 232 aa2.65□□□□□ -1.99
RUB1YDR139C CAJ1P39101 391 aa2.65□□□□□ -1.99
RUB1YDR139C FAR10Q06001 478 aa2.65□□□□□ -1.99
RUB1YDR139C PRM7Q12459 698 aa2.65□□□□□ -1.99
RUB1YDR139C VPS63O13549 108 aa2.64□□□□□ -1.99
RUB1YDR139C RNR2P09938 399 aaKnown RBP2.64□□□□□ -1.99
RUB1YDR139C CTA1P15202 515 aa2.64□□□□□ -1.99
RUB1YDR139C FUS3P16892 353 aaKnown RBP2.64□□□□□ -1.99
RUB1YDR139C CKA2P19454 339 aa2.64□□□□□ -1.99
RUB1YDR139C NAS2P40555 220 aa2.64□□□□□ -1.99
RUB1YDR139C UFE1P41834 346 aa2.64□□□□□ -1.99
RUB1YDR139C PFS2P42841 465 aaKnown RBP2.64□□□□□ -1.99
RUB1YDR139C FYV8P46949 817 aaKnown RBP2.64□□□□□ -1.99
RUB1YDR139C HIT1P46973 164 aa2.64□□□□□ -1.99
RUB1YDR139C YGR016WP53209 190 aa2.64□□□□□ -1.99
RUB1YDR139C SPH1Q06160 661 aa2.64□□□□□ -1.99
RUB1YDR139C YDR018CQ12185 396 aa2.64□□□□□ -1.99
RUB1YDR139C YDR262WQ12331 272 aa2.64□□□□□ -1.99
RUB1YDR139C FLO11P08640 1367 aa2.63□□□□□ -1.99
RUB1YDR139C MHP1P43638 1398 aa2.63□□□□□ -1.99
RUB1YDR139C KTI12P34253 313 aaKnown RBP2.63□□□□□ -1.99
RUB1YDR139C FRM2P37261 193 aa2.63□□□□□ -1.99
RUB1YDR139C TRR2P38816 342 aa2.63□□□□□ -1.99
RUB1YDR139C LIN1P38852 340 aaPredicted RBP2.63□□□□□ -1.99
RUB1YDR139C YIR035CP40579 254 aa2.63□□□□□ -1.99
RUB1YDR139C TAF6P53040 516 aa2.63□□□□□ -1.99
RUB1YDR139C PXR1P53335 271 aaPredicted RBP2.63□□□□□ -1.99
RUB1YDR139C HST4P53688 370 aa2.63□□□□□ -1.99
RUB1YDR139C UTP15Q04305 513 aaKnown RBP2.63□□□□□ -1.99
RUB1YDR139C APC4Q04601 652 aa2.63□□□□□ -1.99
RUB1YDR139C YDR286CQ05530 114 aa2.63□□□□□ -1.99
RUB1YDR139C OPI1P21957 404 aa2.62□□□□□ -1.99
RUB1YDR139C ITR2P30606 609 aa2.62□□□□□ -1.99
RUB1YDR139C VMA5P31412 392 aaKnown RBP2.62□□□□□ -1.99
RUB1YDR139C ACB1P31787 87 aa2.62□□□□□ -1.99
RUB1YDR139C CYM1P32898 989 aa2.62□□□□□ -1.99
RUB1YDR139C CBF5P33322 483 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
RUB1YDR139C RVB1Q03940 463 aaKnown RBP2.62□□□□□ -1.99
RUB1YDR139C BUR2Q05949 395 aa2.62□□□□□ -1.99
RUB1YDR139C PGC1Q08959 321 aa2.62□□□□□ -1.99
RUB1YDR139C APC2Q12440 853 aa2.62□□□□□ -1.99
RUB1YDR139C FAB1P34756 2278 aa2.62□□□□□ -1.99
RUB1YDR139C REP1P03871 373 aa2.61□□□□□ -1.99
RUB1YDR139C MEI5P32489 222 aa2.61□□□□□ -1.99
RUB1YDR139C SKG6P32900 734 aaPredicted RBP2.61□□□□□ -1.99
RUB1YDR139C SMF2P38778 549 aa2.61□□□□□ -1.99
RUB1YDR139C SHE4P51534 789 aa2.61□□□□□ -1.99
RUB1YDR139C INP2Q03824 705 aa2.61□□□□□ -1.99
RUB1YDR139C DTD1Q07648 150 aaKnown RBP2.61□□□□□ -1.99
RUB1YDR139C SAL1D6W196 494 aa2.6□□□□□ -1.99
RUB1YDR139C VMA2P16140 517 aaKnown RBP2.6□□□□□ -1.99
RUB1YDR139C TPM1P17536 199 aaKnown RBP2.6□□□□□ -1.99
RUB1YDR139C PRY2P36110 329 aa2.6□□□□□ -1.99
RUB1YDR139C BDH1P39714 382 aa2.6□□□□□ -1.99
RUB1YDR139C TPC1P53257 314 aa2.6□□□□□ -1.99
RUB1YDR139C INP1Q03694 420 aa2.6□□□□□ -1.99
RUB1YDR139C GMC1Q04399 608 aa2.6□□□□□ -1.99
RUB1YDR139C MRX9Q07349 420 aaKnown RBP2.6□□□□□ -1.99
RUB1YDR139C RDL2Q08742 149 aaKnown RBP2.6□□□□□ -1.99
RUB1YDR139C PRM4Q12498 284 aa2.6□□□□□ -1.99
RUB1YDR139C GAL3P13045 520 aa2.59□□□□□ -1.99
RUB1YDR139C COX10P21592 462 aa2.59□□□□□ -1.99
RUB1YDR139C YKL187CP34231 750 aa2.59□□□□□ -1.99
RUB1YDR139C RFT1P38206 574 aaPredicted RBP2.59□□□□□ -1.99
RUB1YDR139C RCK1P38622 512 aa2.59□□□□□ -1.99
RUB1YDR139C RRG9P40156 214 aa2.59□□□□□ -1.99
RUB1YDR139C MIC19P43594 170 aa2.59□□□□□ -1.99
RUB1YDR139C SDS23P53172 527 aa2.59□□□□□ -1.99
RUB1YDR139C YGR168CP53293 376 aa2.59□□□□□ -1.99
RUB1YDR139C ZRG17P53735 605 aa2.59□□□□□ -1.99
RUB1YDR139C YPR195CQ06594 109 aa2.59□□□□□ -1.99
RUB1YDR139C YDL211CQ12121 372 aa2.59□□□□□ -1.99
RUB1YDR139C YPS3Q12303 508 aa2.59□□□□□ -1.99
RUB1YDR139C SPS100P13130 326 aa2.58□□□□□ -2
RUB1YDR139C TRX1P22217 103 aaKnown RBP2.58□□□□□ -2
RUB1YDR139C SRB2P34162 210 aa2.58□□□□□ -2
RUB1YDR139C ZRT3P34240 503 aa2.58□□□□□ -2
RUB1YDR139C AST1P35183 429 aa2.58□□□□□ -2
RUB1YDR139C CTM1P38818 585 aa2.58□□□□□ -2
RUB1YDR139C PMT4P46971 762 aa2.58□□□□□ -2
RUB1YDR139C FMP48P53233 369 aa2.58□□□□□ -2
RUB1YDR139C YMR244WQ04018 355 aa2.58□□□□□ -2
RUB1YDR139C VTI1Q04338 217 aa2.58□□□□□ -2
RUB1YDR139C YLR012CQ07927 99 aa2.58□□□□□ -2
RUB1YDR139C DFM1Q12743 341 aaKnown RBP2.58□□□□□ -2
RUB1YDR139C CDC37P06101 506 aaKnown RBP2.57□□□□□ -2
RUB1YDR139C RPL18AP0CX49 186 aaKnown RBP2.57□□□□□ -2
RUB1YDR139C RPL18BP0CX50 186 aaKnown RBP2.57□□□□□ -2
RUB1YDR139C YIL054WP40524 105 aa2.57□□□□□ -2
RUB1YDR139C MGR3Q04472 501 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms