RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W IMA2Q08295 589 aa5.37□□□□□ -1.55
TRP1YDR007W MUM3Q08750 479 aa5.37□□□□□ -1.55
TRP1YDR007W THP3Q12049 470 aaKnown RBP5.37□□□□□ -1.55
TRP1YDR007W PAB1P04147 577 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55 RIP-Chip
TRP1YDR007W CLN3P13365 580 aa5.36□□□□□ -1.55
TRP1YDR007W LSB5P25369 354 aa5.36□□□□□ -1.55
TRP1YDR007W YBR056WP38081 501 aa5.36□□□□□ -1.55
TRP1YDR007W ECM31P38122 312 aa5.36□□□□□ -1.55
TRP1YDR007W POP7P38291 140 aa5.36□□□□□ -1.55
TRP1YDR007W MSG5P38590 489 aa5.36□□□□□ -1.55
TRP1YDR007W AIM2P39721 246 aa5.36□□□□□ -1.55
TRP1YDR007W RTT105P40063 208 aa5.36□□□□□ -1.55
TRP1YDR007W COS4P43542 379 aa5.36□□□□□ -1.55
TRP1YDR007W RTT102P53330 157 aa5.36□□□□□ -1.55
TRP1YDR007W COS1P53822 381 aa5.36□□□□□ -1.55
TRP1YDR007W DID2P69771 204 aa5.36□□□□□ -1.55
TRP1YDR007W PET117Q02771 107 aa5.36□□□□□ -1.55
TRP1YDR007W STD1Q02794 444 aa5.36□□□□□ -1.55
TRP1YDR007W SPO77Q06134 477 aa5.36□□□□□ -1.55
TRP1YDR007W YPD1Q07688 167 aa5.36□□□□□ -1.55
TRP1YDR007W SNX3Q08826 162 aaKnown RBP5.36□□□□□ -1.55
TRP1YDR007W YOR214CQ12282 236 aa5.36□□□□□ -1.55
TRP1YDR007W MDY2Q12285 212 aa5.36□□□□□ -1.55
TRP1YDR007W SFG1Q12507 346 aa5.36□□□□□ -1.55
TRP1YDR007W YOS9Q99220 542 aa5.36□□□□□ -1.55
TRP1YDR007W PEX3P28795 441 aa5.35□□□□□ -1.55
TRP1YDR007W PMT2P31382 759 aa5.35□□□□□ -1.55
TRP1YDR007W VMA6P32366 345 aaKnown RBP5.35□□□□□ -1.55
TRP1YDR007W TFC1P32367 649 aa5.35□□□□□ -1.55
TRP1YDR007W GLC7P32598 312 aaKnown RBP5.35□□□□□ -1.55
TRP1YDR007W RGT1P32862 1170 aa5.35□□□□□ -1.55
TRP1YDR007W ARC40P38328 384 aaKnown RBP5.35□□□□□ -1.55
TRP1YDR007W GRE3P38715 327 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
TRP1YDR007W FRT2P39734 528 aa5.35□□□□□ -1.55
TRP1YDR007W SSO2P39926 295 aa5.35□□□□□ -1.55
TRP1YDR007W HAT2P39984 401 aa5.35□□□□□ -1.55
TRP1YDR007W SHO1P40073 367 aa5.35□□□□□ -1.55
TRP1YDR007W PCL7P40186 285 aa5.35□□□□□ -1.55
TRP1YDR007W AIP1P46680 615 aaKnown RBP5.35□□□□□ -1.55
TRP1YDR007W YNR048WP53740 393 aa5.35□□□□□ -1.55
TRP1YDR007W GOR1P53839 350 aa5.35□□□□□ -1.55
TRP1YDR007W RMI1Q02685 241 aa5.35□□□□□ -1.55
TRP1YDR007W YMR027WQ04371 470 aa5.35□□□□□ -1.55
TRP1YDR007W ECM7Q06200 448 aa5.35□□□□□ -1.55
TRP1YDR007W SNA4Q07549 140 aa5.35□□□□□ -1.55
TRP1YDR007W TIM18Q08749 192 aa5.35□□□□□ -1.55
TRP1YDR007W PKH2Q12236 1081 aaKnown RBP5.35□□□□□ -1.55
TRP1YDR007W RNH203Q12338 110 aa5.35□□□□□ -1.55
TRP1YDR007W RMD5Q12508 421 aa5.35□□□□□ -1.55
TRP1YDR007W SLM5P25345 492 aaKnown RBP5.34□□□□□ -1.55
TRP1YDR007W YCR022CP25620 114 aa5.34□□□□□ -1.55
TRP1YDR007W RTC3P38804 111 aaPredicted RBP5.34□□□□□ -1.55
TRP1YDR007W YIL169CP40442 995 aa5.34□□□□□ -1.55
TRP1YDR007W MAM33P40513 266 aa5.34□□□□□ -1.55
TRP1YDR007W MSS2P40990 351 aa5.34□□□□□ -1.55
TRP1YDR007W NAS6P50086 228 aa5.34□□□□□ -1.55
TRP1YDR007W AVT4P50944 713 aa5.34□□□□□ -1.55
TRP1YDR007W YPT32P51996 222 aaKnown RBP5.34□□□□□ -1.55
TRP1YDR007W ARO8P53090 500 aaKnown RBP5.34□□□□□ -1.55
TRP1YDR007W POP6P53218 158 aa5.34□□□□□ -1.55
TRP1YDR007W ARK1P53974 638 aa5.34□□□□□ -1.55
TRP1YDR007W MPS1P54199 764 aa5.34□□□□□ -1.55
TRP1YDR007W YDR476CQ03362 224 aa5.34□□□□□ -1.55
TRP1YDR007W NUP53Q03790 475 aa5.34□□□□□ -1.55
TRP1YDR007W GAL83Q04739 417 aa5.34□□□□□ -1.55
TRP1YDR007W AAD15Q08361 143 aa5.34□□□□□ -1.55
TRP1YDR007W GEP3Q08622 556 aa5.34□□□□□ -1.55
TRP1YDR007W FEX2Q08991 375 aa5.34□□□□□ -1.55
TRP1YDR007W FMP16Q12497 93 aa5.34□□□□□ -1.55
TRP1YDR007W CMC2Q3E7A4 109 aa5.34□□□□□ -1.55
TRP1YDR007W YHR213W-AQ8TGT4 77 aa5.34□□□□□ -1.55
TRP1YDR007W TAD3Q9URQ3 322 aa5.34□□□□□ -1.55
TRP1YDR007W TIP1P27654 210 aaPredicted RBP5.33□□□□□ -1.56
TRP1YDR007W NDC1P32500 655 aa5.33□□□□□ -1.56
TRP1YDR007W VAM7P32912 316 aa5.33□□□□□ -1.56
TRP1YDR007W SKN1P33336 771 aa5.33□□□□□ -1.56
TRP1YDR007W MET30P39014 640 aa5.33□□□□□ -1.56
TRP1YDR007W MMF1P40185 145 aaKnown RBP5.33□□□□□ -1.56
TRP1YDR007W DBP6P53734 629 aaKnown RBP5.33□□□□□ -1.56
TRP1YDR007W SMA2Q04658 369 aa5.33□□□□□ -1.56
TRP1YDR007W YPR091CQ06833 770 aa5.33□□□□□ -1.56
TRP1YDR007W YLL007CQ07799 665 aa5.33□□□□□ -1.56
TRP1YDR007W PEX27Q08580 376 aa5.33□□□□□ -1.56
TRP1YDR007W RRP36Q12481 300 aaPredicted RBP5.33□□□□□ -1.56
TRP1YDR007W ADF1Q2V2Q1 113 aa5.33□□□□□ -1.56
TRP1YDR007W OPI3P05375 206 aa5.32□□□□□ -1.56
TRP1YDR007W MTF1P14908 341 aaKnown RBP5.32□□□□□ -1.56
TRP1YDR007W SAG1P20840 650 aa5.32□□□□□ -1.56
TRP1YDR007W RPC25P35718 212 aa5.32□□□□□ -1.56
TRP1YDR007W PTK1P36002 662 aaPredicted RBP5.32□□□□□ -1.56
TRP1YDR007W YBR139WP38109 508 aa5.32□□□□□ -1.56
TRP1YDR007W MMS21P38632 267 aa5.32□□□□□ -1.56
TRP1YDR007W YDR089WP38966 869 aa5.32□□□□□ -1.56
TRP1YDR007W MNN9P39107 395 aaKnown RBP5.32□□□□□ -1.56
TRP1YDR007W SEO1P39709 593 aa5.32□□□□□ -1.56
TRP1YDR007W ALG8P40351 577 aa5.32□□□□□ -1.56
TRP1YDR007W UTP25P40498 721 aaKnown RBP5.32□□□□□ -1.56
TRP1YDR007W LIA1P47120 325 aaKnown RBP5.32□□□□□ -1.56
TRP1YDR007W CAF40P53829 373 aa5.32□□□□□ -1.56
TRP1YDR007W MRP51Q02950 344 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms