RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
SOK1	YDR006C	MKK1	P32490	508 aa		2.61	□□□□□ -1.99
SOK1	YDR006C	LHP1	P33399	275 aa	Known RBP	2.61	□□□□□ -1.99
SOK1	YDR006C	PCL5	P38794	229 aa		2.61	□□□□□ -1.99
SOK1	YDR006C	BAT1	P38891	393 aa	Known RBP	2.61	□□□□□ -1.99
SOK1	YDR006C	MET30	P39014	640 aa		2.61	□□□□□ -1.99
SOK1	YDR006C	SEC72	P39742	193 aa	Known RBP	2.61	□□□□□ -1.99
SOK1	YDR006C	CTK3	P46963	296 aa	Predicted RBP	2.61	□□□□□ -1.99
SOK1	YDR006C	YJR141W	P47172	347 aa	Predicted RBP	2.61	□□□□□ -1.99
SOK1	YDR006C	RRP17	Q04031	235 aa	Predicted RBP	2.61	□□□□□ -1.99
SOK1	YDR006C	BNA7	Q04066	261 aa		2.61	□□□□□ -1.99
SOK1	YDR006C	TSA2	Q04120	196 aa		2.61	□□□□□ -1.99
SOK1	YDR006C	YDL009C	Q12210	107 aa		2.61	□□□□□ -1.99
SOK1	YDR006C	RPN6	Q12377	434 aa		2.61	□□□□□ -1.99
SOK1	YDR006C	RPL31A	P0C2H8	113 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	SPO12	P17123	173 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	ISY1	P21374	235 aa	Predicted RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	MCK1	P21965	375 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	SAT4	P25333	603 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	LAC1	P28496	418 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	PPZ2	P33329	710 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	MYO3	P36006	1272 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	GPX2	P38143	162 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	FIG1	P38224	298 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	OSH3	P38713	996 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	EXO1	P39875	702 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	YIL067C	P40514	678 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	OST3	P48439	350 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	AZR1	P50080	613 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	IMD3	P50095	523 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	YNR048W	P53740	393 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	HSP31	Q04432	237 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	THI7	Q05998	598 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	RIF2	Q06208	395 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	GPM2	Q12008	311 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	YLL067C	Q07888	1374 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	RAD50	P12753	1312 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	ADK1	P07170	222 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	NHP6B	P11633	99 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	SNA3	P14359	133 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	KIN3	P22209	435 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	IES6	P32617	166 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	CDC13	P32797	924 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	APS3	P47064	194 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	ASN1	P49089	572 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	MTM1	P53320	366 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	IST1	P53843	298 aa	Predicted RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	APM1	Q00776	475 aa	Predicted RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	EBS1	Q03466	884 aa	Known RBP	2.6	□□□□□ -1.99
SOK1	YDR006C	YDL057W	Q07379	328 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	YNG1	Q08465	219 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	YLR053C	Q12026	108 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	APC9	Q12107	265 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	ORT1	Q12375	292 aa		2.6	□□□□□ -1.99
SOK1	YDR006C	HTB1	P02293	131 aa	Known RBP	2.59	□□□□□ -1.99
SOK1	YDR006C	HTB2	P02294	131 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	BAR1	P12630	587 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	AMD1	P15274	810 aa	Known RBP	2.59	□□□□□ -1.99
SOK1	YDR006C	YHI9	P38765	294 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	SHO1	P40073	367 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	SFH5	P47008	294 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	LST7	P53237	242 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	MAL13	P53338	473 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	YIF1	P53845	314 aa	Known RBP	2.59	□□□□□ -1.99
SOK1	YDR006C	SCS7	Q03529	384 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	SNU56	Q03782	492 aa	Known RBP	2.59	□□□□□ -1.99
SOK1	YDR006C	TAZ1	Q06510	381 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	SFM1	Q12314	213 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	EMP46	Q12396	444 aa		2.59	□□□□□ -1.99
SOK1	YDR006C	POX1	P13711	748 aa		2.59	□□□□□ -2
SOK1	YDR006C	DBF2	P22204	572 aa		2.59	□□□□□ -2
SOK1	YDR006C	FUN19	P28003	413 aa	Predicted RBP	2.59	□□□□□ -2
SOK1	YDR006C	YMC1	P32331	307 aa		2.59	□□□□□ -2
SOK1	YDR006C	VPH2	P32341	215 aa		2.59	□□□□□ -2
SOK1	YDR006C	SPS18	P32572	300 aa		2.59	□□□□□ -2
SOK1	YDR006C	YBR137W	P38276	179 aa		2.59	□□□□□ -2
SOK1	YDR006C	ISC1	P40015	477 aa	Known RBP	2.59	□□□□□ -2
SOK1	YDR006C	FAU1	P40099	211 aa		2.59	□□□□□ -2
SOK1	YDR006C	ZRG17	P53735	605 aa		2.59	□□□□□ -2
SOK1	YDR006C	ALG11	P53954	548 aa	Known RBP	2.59	□□□□□ -2
SOK1	YDR006C	SMP3	Q04174	516 aa		2.59	□□□□□ -2
SOK1	YDR006C	COQ10	Q08058	207 aa		2.59	□□□□□ -2
SOK1	YDR006C	MMT2	Q08970	484 aa		2.59	□□□□□ -2
SOK1	YDR006C	SRL2	Q12020	392 aa		2.59	□□□□□ -2
SOK1	YDR006C	SIA1	Q12212	622 aa		2.59	□□□□□ -2
SOK1	YDR006C	YGK3	Q12222	375 aa	Predicted RBP	2.59	□□□□□ -2
SOK1	YDR006C	HEM2	P05373	342 aa		2.58	□□□□□ -2
SOK1	YDR006C	RHO2	P06781	192 aa		2.58	□□□□□ -2
SOK1	YDR006C	SSC1	P0CS90	654 aa	Known RBP	2.58	□□□□□ -2
SOK1	YDR006C	COS2	P0CX12	379 aa		2.58	□□□□□ -2
SOK1	YDR006C	COS3	P0CX13	379 aa		2.58	□□□□□ -2
SOK1	YDR006C	STE18	P18852	110 aa		2.58	□□□□□ -2
SOK1	YDR006C	UGX2	P32772	223 aa		2.58	□□□□□ -2
SOK1	YDR006C	LOS1	P33418	1100 aa	Predicted RBP	2.58	□□□□□ -2
SOK1	YDR006C	MDM31	P38880	579 aa		2.58	□□□□□ -2
SOK1	YDR006C	COS4	P43542	379 aa		2.58	□□□□□ -2
SOK1	YDR006C	MOG1	P47123	218 aa		2.58	□□□□□ -2
SOK1	YDR006C	UBC12	P52491	188 aa		2.58	□□□□□ -2
SOK1	YDR006C	SEH1	P53011	349 aa	Known RBP	2.58	□□□□□ -2
SOK1	YDR006C	TPN1	P53099	579 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms